RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 SLC46A2Q9BY10 475 aa14.44□□□□□ -0.1
SDF2-201ENST00000247020 POLR1EQ9GZS1 481 aaKnown RBP14.44□□□□□ -0.1
SDF2-201ENST00000247020 MSRAQ9UJ68 235 aa14.44□□□□□ -0.1
SDF2-201ENST00000247020 ZNF180Q9UJW8 692 aa14.44□□□□□ -0.1
SDF2-201ENST00000247020 MAD1L1Q9Y6D9 718 aa14.44□□□□□ -0.1
SDF2-201ENST00000247020 LEFTY2O00292 366 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MOSPD3O75425 235 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 RFPL2O75678 378 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 POLBP06746 335 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 CES1P23141 567 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MGAT1P26572 445 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 ADRA1AP35348 466 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 ACVRL1P37023 503 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 AVPR1AP37288 418 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 CCR2P41597 374 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MSH2P43246 934 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 SGSHP51688 502 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 SLC10A7Q0GE19 358 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MPPE1Q53F39 396 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 PRSS36Q5K4E3 855 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 SPANXN3Q5MJ09 141 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 FAM182AQ5T1J6 154 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 GPR158Q5T848 1215 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 CXorf57Q6NSI4 855 aaKnown RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 CAPN12Q6ZSI9 719 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MPP5Q8N3R9 675 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 DNAAF3Q8N9W5 541 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 PTCD2Q8WV60 388 aaKnown RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 SLC44A1Q8WWI5 657 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 TADA1Q96BN2 335 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 CFAP36Q96G28 342 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 PAFAH2Q99487 392 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 ARNT2Q9HBZ2 717 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 NT5MQ9NPB1 228 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 HCFC1R1Q9NWW0 138 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 CFAP97Q9P2B7 532 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 HCFC2Q9Y5Z7 792 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 FAM237BA0A1B0GVD1 139 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 FAM159BA6NKW6 160 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 F5H423 210 aaPredicted RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 POC1B-GALNT4F8VUJ3 575 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 TBL1XO60907 577 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 USP1O94782 785 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 C1QAP02745 245 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 WEE1P30291 646 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 GYS2P54840 703 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 SESN2P58004 480 aaPredicted RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 ZNF235Q14590 738 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 TERF2Q15554 542 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 DUSP6Q16828 381 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 IL31Q6EBC2 164 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 POTEHQ6S545 545 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 TMEM135Q86UB9 458 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 EXOC3L1Q86VI1 746 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 ZNF557Q8N988 423 aaPredicted RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 GDF15Q99988 308 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 FSD1LQ9BXM9 530 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 PBX4Q9BYU1 374 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 PLAC1Q9HBJ0 212 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MRM3Q9HC36 420 aaKnown RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 ATP13A1Q9HD20 1204 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 SYBUQ9NX95 663 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 MOCS1Q9NZB8 636 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 UBA2Q9UBT2 640 aaPredicted RBP14.43□□□□□ -0.1
SDF2-201ENST00000247020 SEPT3Q9UH03 358 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 IKBKGQ9Y6K9 419 aa14.43□□□□□ -0.1
SDF2-201ENST00000247020 DOCK6Q96HP0 2047 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 A0A0D9SEW6 157 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 IQANK1A0A1B0GTG1 560 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 SRRM3A6NNA2 597 aaPredicted RBP14.42□□□□□ -0.1
SDF2-201ENST00000247020 H0Y626 953 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 TSPAN3O60637 253 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 SHOX2O60902 331 aaPredicted RBP14.42□□□□□ -0.1
SDF2-201ENST00000247020 HPDP32754 393 aaPredicted RBP14.42□□□□□ -0.1
SDF2-201ENST00000247020 MTM1Q13496 603 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 SPARCL1Q14515 664 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 CRYMQ14894 314 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 TMED2Q15363 201 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 TEAD2Q15562 447 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 KBTBD12Q3ZCT8 623 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 CASC4Q6P4E1 433 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 KDELC1Q6UW63 502 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 RANBP10Q6VN20 620 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 TRABD2AQ86V40 505 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 SLC26A11Q86WA9 606 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 LRRC6Q86X45 466 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 TDRD5Q8NAT2 981 aaKnown RBP14.42□□□□□ -0.1
SDF2-201ENST00000247020 OR7D4Q8NG98 312 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 SPATA22Q8NHS9 363 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 DCAKDQ8WVC6 231 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 CDKL2Q92772 493 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 ZNF707Q96C28 371 aaPredicted RBP14.42□□□□□ -0.1
SDF2-201ENST00000247020 OTUB2Q96DC9 234 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 MRGPRX2Q96LB1 330 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 PSKH2Q96QS6 385 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 MGME1Q9BQP7 344 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 CAPS2Q9BXY5 557 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 DZANK1Q9NVP4 752 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 TBC1D14Q9P2M4 693 aa14.42□□□□□ -0.1
SDF2-201ENST00000247020 CTNNAL1Q9UBT7 734 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms