RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 CLCN6P51797 869 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 ADCY2Q08462 1091 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 SIM2Q14190 667 aaPredicted RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 TAZQ16635 292 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 ATXN7L2Q5T6C5 722 aaPredicted RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 SPOCD1Q6ZMY3 1216 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 DPY19L3Q6ZPD9 716 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 METTL3Q86U44 580 aaKnown RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 KBTBD6Q86V97 674 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 KATNAL2Q8IYT4 538 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 DEFB119Q8N690 84 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 SUMF1Q8NBK3 374 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 CALR3Q96L12 384 aaKnown RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 TM6SF2Q9BZW4 377 aa14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 IPO11Q9UI26 975 aaKnown RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 PACSIN2Q9UNF0 486 aaPredicted RBP14.67□□□□□ -0.06
SUPT4H1-201ENST00000225504 SDK1Q7Z5N4 2213 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 IGHV1OR15-9A0A0B4J2B8 117 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 MID1O15344 667 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 MAFKO60675 156 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 TMCC1O94876 653 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZRANB2O95218 330 aaKnown RBP eCLIP14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 PEX11BO96011 259 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 SLC8A1P32418 973 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 CNR2P34972 360 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 POM121L1PQ3SYA9 428 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 INO80DQ53TQ3 878 aaPredicted RBP14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 CARD16Q5EG05 197 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 FAM182AQ5T1J6 154 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZNF776Q68DI1 518 aaPredicted RBP14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 AADACL2Q6P093 401 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZC3H14Q6PJT7 736 aaKnown RBP14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 NPNTQ6UXI9 565 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 CEP68Q76N32 757 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 FAM124AQ86V42 546 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 RCOR2Q8IZ40 523 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 TXLNBQ8N3L3 684 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 RNF10Q8N5U6 811 aaKnown RBP14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 PLD5Q8N7P1 536 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 OR6K2Q8NGY2 324 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 ALG3Q92685 438 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 USP36Q9P275 1121 aaKnown RBP14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 SERGEFQ9UGK8 458 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 PPM1HQ9ULR3 514 aa14.66□□□□□ -0.06
SUPT4H1-201ENST00000225504 CXorf51AA0A1B0GTR3 108 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZSCAN5CA6NGD5 496 aaPredicted RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZNF487B1APH4 448 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 KRT86O43790 486 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 IL1BP01584 269 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 CTNNA2P26232 953 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 CHRNA3P32297 505 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 PSMD8P48556 350 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 DYNLT1P63172 113 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 IL10RBQ08334 325 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 SLC10A7Q0GE19 358 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 ELAVL3Q14576 367 aaKnown RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 CST6Q15828 149 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 IFI16Q16666 785 aaKnown RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 ARSIQ5FYB1 569 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 SLC9A4Q6AI14 798 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 PRR23BQ6ZRT6 265 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 ZNF662Q6ZS27 426 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 PEX26Q7Z412 305 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 RFX6Q8HWS3 928 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 AADATQ8N5Z0 425 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 PCDH20Q8N6Y1 951 aaKnown RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 OR8D1Q8WZ84 308 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 ISG20Q96AZ6 181 aaKnown RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 HERPUD2Q9BSE4 406 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 HEMGNQ9BXL5 484 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 CEP44Q9C0F1 390 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 DUSP15Q9H1R2 295 aaPredicted RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 EPC1Q9H2F5 836 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 FBRSQ9HAH7 460 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 SAE1Q9UBE0 346 aaPredicted RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 LHX3Q9UBR4 397 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 UBA2Q9UBT2 640 aaPredicted RBP14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 AMFRQ9UKV5 643 aa14.65□□□□□ -0.06
SUPT4H1-201ENST00000225504 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 PROB1E7EW31 1015 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 INSIG1O15503 277 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 DDX3YO15523 660 aaKnown RBP14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 RNASEH1O60930 286 aaKnown RBP14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 ZNF217O75362 1048 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 DNTTP04053 509 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 ACADMP11310 421 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 RGRP47804 291 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 CCNHP51946 323 aaPredicted RBP14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 GEMIN4P57678 1058 aaKnown RBP14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 GALNT2Q10471 571 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 PLK5Q496M5 336 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 ODF2Q5BJF6 829 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 KAZNQ674X7 775 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 B4GALNT4Q76KP1 1039 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 TMEFF1Q8IYR6 380 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 EXD1Q8NHP7 514 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 PIP4K2CQ8TBX8 421 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 TOE1Q96GM8 510 aaKnown RBP14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 EXOC2Q96KP1 924 aa14.64□□□□□ -0.07
SUPT4H1-201ENST00000225504 MAK16Q9BXY0 300 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms