RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 POLMQ9NP87 494 aaPredicted RBP20.57■□□□□ 0.88
RHBDD3-201ENST00000216085 SPATA6Q9NWH7 488 aaPredicted RBP20.57■□□□□ 0.88
RHBDD3-201ENST00000216085 HCN2Q9UL51 889 aa20.57■□□□□ 0.88
RHBDD3-201ENST00000216085 SAR1BQ9Y6B6 198 aa20.57■□□□□ 0.88
RHBDD3-201ENST00000216085 TARSL2A2RTX5 802 aaKnown RBP20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 MTSS1O43312 755 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 GPR37L1O60883 481 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 TMCC1O94876 653 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 MT-CO1P00395 513 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 RENBPP51606 427 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 DGKEP52429 567 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 TMEM31Q5JXX7 168 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 PAPD7Q5XG87 772 aaKnown RBP20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 SYT10Q6XYQ8 523 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 LEKR1Q6ZMV7 388 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 CDKL3Q8IVW4 592 aaPredicted RBP20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 MYO19Q96H55 970 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 SAE1Q9UBE0 346 aaPredicted RBP20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 SEPT3Q9UH03 358 aa20.56■□□□□ 0.88
RHBDD3-201ENST00000216085 FAM86C2PA6NEL3 165 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 TTC34A8MYJ7 566 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 H7C0C1 242 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 SGK1O00141 431 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 PGRMC1O00264 195 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 MATN3O15232 486 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 PI15O43692 258 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 ALDH1A2O94788 518 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 CHRM1P11229 460 aaPredicted RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 PRKCHP24723 683 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 HSPA9P38646 679 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 ATP5OP48047 213 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 EIF3EP60228 445 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 RHOAP61586 193 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 MTAPQ13126 283 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 LBRQ14739 615 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 MARC1Q5VT66 337 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 ZC3H18Q86VM9 953 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 HERPUD2Q9BSE4 406 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 DLGAP2Q9P1A6 1054 aa20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 FCF1Q9Y324 198 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 NYNRINQ9P2P1 1898 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 MUC22E2RYF6 1773 aaPredicted RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 MYO18AQ92614 2054 aaKnown RBP20.55■□□□□ 0.88
RHBDD3-201ENST00000216085 ADAM23O75077 832 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 HLA-EP13747 358 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 SNRPD1P62314 119 aaKnown RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 HNRNPDQ14103 355 aaKnown RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 CRY1Q16526 586 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 HEATR6Q6AI08 1181 aaKnown RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 MAMSTRQ6ZN01 415 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 DSG4Q86SJ6 1040 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 RASGEF1CQ8N431 466 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 QKIQ96PU8 341 aaKnown RBP eCLIP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 LGMNQ99538 433 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 HOMER3Q9NSC5 361 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 TTC7AQ9ULT0 858 aaPredicted RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 WASH3PC4AMC7 463 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 K7ERQ8 282 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 RNASEH1O60930 286 aaKnown RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 IGSF6O95976 241 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 MMP13P45452 471 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 CXCL12P48061 93 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 GAS6Q14393 721 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 ELAVL3Q14576 367 aaKnown RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 SLC45A4Q5BKX6 768 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 PKN3Q6P5Z2 889 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 Q6ZVU0 165 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 ADAT2Q7Z6V5 191 aaKnown RBP20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 ZNF366Q8N895 744 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 TSTD1Q8NFU3 115 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 ACTRT1Q8TDG2 376 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 GDAP1L1Q96MZ0 367 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 AMACRQ9UHK6 382 aa20.54■□□□□ 0.88
RHBDD3-201ENST00000216085 ATG2BQ96BY7 2078 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 GOLGA6L10A0A0M3HER8 536 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 ANTXRLA6NF34 631 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 LAMTOR5O43504 91 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 SMAD6O43541 496 aaKnown RBP20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 BNIP3LO60238 219 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 STK10O94804 968 aaKnown RBP20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 CD160O95971 181 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 GSRP00390 522 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 RBP3P10745 1247 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 CCNB1P14635 433 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 PRKD1Q15139 912 aaPredicted RBP20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 RYBPQ8N488 228 aaPredicted RBP20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 TMEM105Q8N8V8 129 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 FRS2Q8WU20 508 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 OR8D1Q8WZ84 308 aa20.53■□□□□ 0.88
RHBDD3-201ENST00000216085 ALOX15BO15296 676 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 RAD51Q06609 339 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 CAMK2GQ13555 558 aaPredicted RBP20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 DARS2Q6PI48 645 aaKnown RBP20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 PLPP6Q8IY26 295 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 OR2AP1Q8NGE2 309 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 MAML1Q92585 1016 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 PSKH2Q96QS6 385 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 TM6SF2Q9BZW4 377 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 SEPT10Q9P0V9 454 aa20.52■□□□□ 0.88
RHBDD3-201ENST00000216085 RNF14Q9UBS8 474 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms