RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DNAH12Q6ZR08 3092 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 VWA8A3KMH1 1905 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 NYNRINQ9P2P1 1898 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 E2F8A0AVK6 867 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 A8MUI8 341 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 H7C4K7 107 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 GYG2O15488 501 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 PMPCBO75439 489 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TRPA1O75762 1119 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ALDH2P05091 517 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 CPA3P15088 417 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 USP46P62068 366 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 E2F5Q15329 346 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 PSMD5Q16401 504 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MS4A13Q5J8X5 152 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 C10orf120Q5SQS8 335 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ARMC3Q5W041 872 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 FUT10Q6P4F1 479 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 C14orf80Q86SX3 495 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 LCA5Q86VQ0 697 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MIB1Q86YT6 1006 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 UMODL1-AS1Q8N2C9 162 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 AGAP11Q8TF27 550 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 AZIN2Q96A70 460 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 GPR22Q99680 433 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 BTBD10Q9BSF8 475 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 FAM167BQ9BTA0 163 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SEZ6LQ9BYH1 1024 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SLC25A51Q9H1U9 297 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 ARL8BQ9NVJ2 186 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TMEM248Q9NWD8 314 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 NOP53Q9NZM5 478 aaKnown RBP8.39□□□□□ -1.07
VAMP3-201ENST00000054666 MARCH2Q9P0N8 246 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 SLC39A10Q9ULF5 831 aa8.39□□□□□ -1.07
VAMP3-201ENST00000054666 TTC3P53804 2025 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 MTMR11A4FU01 709 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GOLGA8TH3BQL2 631 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 C2P06681 752 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SERPINA6P08185 405 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 FGFR3P22607 806 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ABCG1P45844 678 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ABCE1P61221 599 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ITKQ08881 620 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ITGA9Q13797 1035 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 HNRNPDQ14103 355 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 RCN2Q14257 317 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 USP10Q14694 798 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ARHGEF6Q15052 776 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 PCSK7Q16549 785 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 DEFB115Q30KQ5 88 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CFAP157Q5JU67 520 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SWT1Q5T5J6 900 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 FAM43BQ6ZT52 329 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TTC7BQ86TV6 843 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ZC3HC1Q86WB0 502 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CNTN4Q8IWV2 1026 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TTC9BQ8N6N2 239 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 DBF4BQ8NFT6 615 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 C2orf15Q8WU43 125 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 FATE1Q969F0 183 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 UTP4Q969X6 686 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 PABPC5Q96DU9 382 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 PTCD3Q96EY7 689 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 HMCESQ96FZ2 354 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CFHR5Q9BXR6 569 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 OXCT2Q9BYC2 517 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 UBE2OQ9C0C9 1292 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 CAB39LQ9H9S4 337 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 NT5MQ9NPB1 228 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 PRDM5Q9NQX1 630 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 VPS45Q9NRW7 570 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 COMMD8Q9NX08 183 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ARMCX1Q9P291 453 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SORCS3Q9UPU3 1222 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 PHF24Q9UPV7 400 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 MRPL42Q9Y6G3 142 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SLC12A8A0AV02 714 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 FAM92AA1XBS5 289 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 HEATR9A2RTY3 570 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TMEM114B3SHH9 223 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 RAMP2O60895 175 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 LYPLA1O75608 230 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 VAPBO95292 243 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 HSPA4LO95757 839 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GSRP00390 522 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SAT1P21673 171 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 ADRA1AP35348 466 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SLC11A1P49279 550 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 KPNA2P52292 529 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 KPNA1P52294 538 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GTF2A1P52655 376 aaPredicted RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 SLC12A2P55011 1212 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 TAF10Q12962 218 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GPR17Q13304 367 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 MRPL58Q14197 206 aaKnown RBP8.38□□□□□ -1.07
VAMP3-201ENST00000054666 GRM3Q14832 879 aa8.38□□□□□ -1.07
VAMP3-201ENST00000054666 PREPLQ4J6C6 727 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms