RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 C1QBPQ07021 282 aaKnown RBP18.14■□□□□ 0.49
PNKP-230ENST00000638016 CNTN1Q12860 1018 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 PPP1R15BQ5SWA1 713 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 C6orf118Q5T5N4 469 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 AGBL4Q5VU57 503 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 ACAD10Q6JQN1 1059 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 RWDD4Q6NW29 188 aaKnown RBP18.14■□□□□ 0.49
PNKP-230ENST00000638016 DNAJC24Q6P3W2 148 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 C22orf39Q6P5X5 142 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 NLRP14Q86W24 1093 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 MCOLN2Q8IZK6 566 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 OR2A12Q8NGT7 310 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 OR2T34Q8NGX1 318 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 PPP1R9BQ96SB3 815 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 C2orf49Q9BVC5 232 aaPredicted RBP18.14■□□□□ 0.49
PNKP-230ENST00000638016 ATP13A1Q9HD20 1204 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 DNAI1Q9UI46 699 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 ANGPTL2Q9UKU9 493 aa18.14■□□□□ 0.49
PNKP-230ENST00000638016 A0A1W2PPC4 97 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 ILVBLA1L0T0 632 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 SIGLEC16A6NMB1 481 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 UPK3BL1B0FP48 263 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 UPK3BL2E5RIL1 263 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 MCF2LO15068 1137 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 ZNF821O75541 412 aaPredicted RBP18.13■□□□□ 0.49
PNKP-230ENST00000638016 MAT2AP31153 395 aaKnown RBP18.13■□□□□ 0.49
PNKP-230ENST00000638016 GRIA4P48058 902 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 IL9RQ01113 521 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 GNA12Q03113 381 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 PRAMEF14Q5SWL7 426 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 LEKR1Q6ZMV7 388 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 ZNF571Q7Z3V5 609 aaPredicted RBP18.13■□□□□ 0.49
PNKP-230ENST00000638016 NAXDQ8IW45 347 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 GRIN3AQ8TCU5 1115 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 FAM131CQ96AQ9 280 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 ARRDC3Q96B67 414 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 ZDHHC5Q9C0B5 715 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 TTYH3Q9C0H2 523 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 SLC32A1Q9H598 525 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 HAUS4Q9H6D7 363 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 TM7SF3Q9NS93 570 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 PPARGC1AQ9UBK2 798 aaKnown RBP18.13■□□□□ 0.49
PNKP-230ENST00000638016 WASF3Q9UPY6 502 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 ANKRD6Q9Y2G4 727 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 FCF1Q9Y324 198 aaKnown RBP18.13■□□□□ 0.49
PNKP-230ENST00000638016 FRYQ5TBA9 3013 aa18.13■□□□□ 0.49
PNKP-230ENST00000638016 LRRC72A6NJI9 287 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 CD160O95971 181 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 PLEKP08567 350 aaPredicted RBP18.12■□□□□ 0.49
PNKP-230ENST00000638016 SKILP12757 684 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 TNFAIP3P21580 790 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 TAS2R38P59533 333 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 ASIC2Q16515 512 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 KLHL40Q2TBA0 621 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 ARL13BQ3SXY8 428 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 SCYL2Q6P3W7 929 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 NETO2Q8NC67 525 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 TRIM7Q9C029 511 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 OSBPL2Q9H1P3 480 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 GPATCH2LQ9NWQ4 482 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 CA5BQ9Y2D0 317 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 BTBD3Q9Y2F9 522 aa18.12■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3DA0A087WVF3 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3IA0A087WXS9 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3EA0A087X179 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3KA0A087X1G2 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3FA6NER0 549 aaPredicted RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3LB9A6J9 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 H0Y8X5 98 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 KPNA3O00505 521 aaPredicted RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 PLRG1O43660 514 aaKnown RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 HYAL3O43820 417 aaPredicted RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 CER1O95813 267 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 SERPINC1P01008 464 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3HP0C7X1 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 CHRNA3P32297 505 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 SERPINH1P50454 418 aaKnown RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 ZNF143P52747 638 aaPredicted RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 SHC2P98077 582 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 NRG1Q02297 640 aaPredicted RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 NR1I3Q14994 352 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 FILIP1LQ4L180 1135 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 PIP5KL1Q5T9C9 394 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3GQ6DHY5 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3CQ6IPX1 549 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 DPY19L3Q6ZPD9 716 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 ADAT2Q7Z6V5 191 aaKnown RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 DSG4Q86SJ6 1040 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D3Q8IZP1 549 aaPredicted RBP18.11■□□□□ 0.49
PNKP-230ENST00000638016 NTAN1Q96AB6 310 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TBC1D31Q96DN5 1066 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TM6SF2Q9BZW4 377 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 OSGEPQ9NPF4 335 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 AASDHPPTQ9NRN7 309 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 TMEM248Q9NWD8 314 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 CACNA1BQ00975 2339 aa18.11■□□□□ 0.49
PNKP-230ENST00000638016 A0A1W2PQC6 194 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 C1QTNF3-AMACRE9PGA6 284 aa18.1■□□□□ 0.49
PNKP-230ENST00000638016 DDX3XO00571 662 aaKnown RBP eCLIP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms