RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 STK39Q9UEW8 545 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 DCDC2Q9UHG0 476 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 F5H423 210 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 KIF1CO43896 1103 aaKnown RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ZNF189O75820 626 aaPredicted RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 SMNDC1O75940 238 aaKnown RBP eCLIP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 KRT36O76013 467 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 SOD2P04179 222 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PRKCGP05129 697 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ENO1P06733 434 aaKnown RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 ITGA2BP08514 1039 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 FAM163BP0C2L3 166 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 KITP10721 976 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 FGFR3P22607 806 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 VHLP40337 213 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 TUBB3Q13509 450 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PCLAFQ15004 111 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PAQR9Q6ZVX9 377 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 DDX53Q86TM3 631 aaKnown RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 RBM15BQ8NDT2 890 aaKnown RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 SLC28A3Q9HAS3 691 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 DDX43Q9NXZ2 648 aaKnown RBP17.8■□□□□ 0.44
FAM3A-222ENST00000621967 DONSONQ9NYP3 566 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 STAP1Q9ULZ2 295 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 PSAT1Q9Y617 370 aa17.8■□□□□ 0.44
FAM3A-222ENST00000621967 COL4A4P53420 1690 aaPredicted RBP17.79■□□□□ 0.44
FAM3A-222ENST00000621967 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.79■□□□□ 0.44
FAM3A-222ENST00000621967 F8W8V4 182 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 BEST1O76090 585 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 CPA2P48052 419 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 TSNAXIP1Q2TAA8 658 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
FAM3A-222ENST00000621967 C16orf46Q6P387 395 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 THEM5Q8N1Q8 247 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 FBXO27Q8NI29 283 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 PIWIL2Q8TC59 973 aaKnown RBP17.79■□□□□ 0.44
FAM3A-222ENST00000621967 DNAJC9Q8WXX5 260 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 ATP2A3Q93084 1043 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 ISL2Q96A47 359 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 VN1R3Q9BXE9 311 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 C1orf21Q9H246 121 aa17.79■□□□□ 0.44
FAM3A-222ENST00000621967 STX18Q9P2W9 335 aaKnown RBP17.79■□□□□ 0.44
FAM3A-222ENST00000621967 SPECC1L-ADORA2AF8WAN1 911 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 M0QYT0 321 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 PROCP04070 461 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 AOC1P19801 751 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 DNAJB2P25686 324 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 MAGEA12P43365 314 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 AIF1P55008 147 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RPL10AP62906 217 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SLC34A1Q06495 639 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SPANXN3Q5MJ09 141 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RTP2Q5QGT7 225 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 ZNF280DQ6N043 979 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 CLEC20AQ6ZU45 233 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RFX8Q6ZV50 586 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 TAS1R1Q7RTX1 841 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SPRED2Q7Z698 418 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 WDR75Q8IWA0 830 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 EBF4Q9BQW3 602 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 HERC2P3Q9BVR0 1158 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 NMRK1Q9NWW6 199 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RAD54BQ9Y620 910 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 VWA8A3KMH1 1905 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 A0A1W2PPC1 479 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 C5orf67F2Z3F1 127 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 EEF2KO00418 725 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 GABRDO14764 452 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 NVLO15381 856 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 ITM2AO43736 263 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SERPINE1P05121 402 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 URODP06132 367 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RB1P06400 928 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 POLBP06746 335 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 PCSK1P29120 753 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 GP5P40197 560 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 ERVK-21P61565 698 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SMAD3P84022 425 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SCAPQ12770 1279 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SEMA3BQ13214 749 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 FRG1Q14331 258 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 DNAL1Q4LDG9 190 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RABGAP1LQ5R372 815 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 SYPL2Q5VXT5 272 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RASSF3Q86WH2 238 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 RNF168Q8IYW5 571 aaPredicted RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 NETO2Q8NC67 525 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 PPP1R14CQ8TAE6 165 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 NTAN1Q96AB6 310 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 CERS2Q96G23 380 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 GORASP1Q9BQQ3 440 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 CEP41Q9BYV8 373 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 PIGVQ9NUD9 493 aa17.78■□□□□ 0.44
FAM3A-222ENST00000621967 PIH1D1Q9NWS0 290 aaKnown RBP17.78■□□□□ 0.44
FAM3A-222ENST00000621967 PRR5-ARHGAP8B1AHC4 643 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CLDN5O00501 218 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 CREB3O43889 395 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 TBX10O75333 385 aa17.77■□□□□ 0.44
FAM3A-222ENST00000621967 LYPLA1O75608 230 aaPredicted RBP17.77■□□□□ 0.44
FAM3A-222ENST00000621967 TM7SF2O76062 418 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms