RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 NDFIP2Q9NV92 336 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 DNAJC17Q9NVM6 304 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 MPP6Q9NZW5 540 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 STIM2Q9P246 746 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 CTTNBP2NLQ9P2B4 639 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 PCSK1NQ9UHG2 260 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LCMT1Q9UIC8 334 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ANAPC7Q9UJX3 599 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 VANGL2Q9ULK5 521 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 TTC7AQ9ULT0 858 aaPredicted RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 FZD10Q9ULW2 581 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 HPCAL4Q9UM19 191 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 PLA2G4CQ9UP65 541 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 MFHAS1Q9Y4C4 1052 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 SCINQ9Y6U3 715 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 ATXN2Q99700 1313 aaKnown RBP5.39□□□□□ -1.55
SHMT1-211ENST00000618902 NUMA1Q14980 2115 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 LAMA5O15230 3695 aa5.39□□□□□ -1.55
SHMT1-211ENST00000618902 FREM2Q5SZK8 3169 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 A0A087WUV0 522 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 GOLGA6CA6NDK9 693 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 GOLGA6L10A6NI86 522 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 TMEM110-MUSTN1A8MSY1 372 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 HMGB1P1B2RPK0 211 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 E9PAM4 449 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 AXIN1O15169 862 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 BUB1BO60566 1050 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ADAM23O75077 832 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RPP40O75818 363 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 LRIG2O94898 1065 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 LUC7L3O95232 432 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 MOCS3O95396 460 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CD48P09326 243 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 GOLGA6DP0CG33 693 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RARAP10276 462 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 IL4RP24394 825 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 MZF1P28698 734 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 L1CAMP32004 1257 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 HTR7P34969 479 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 NUDT1P36639 197 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ETFBP38117 255 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 NNMTP40261 264 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CTSOP43234 321 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 MARCKSL1P49006 195 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF135P52742 658 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 DRG2P55039 364 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 EIF3BP55884 814 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 SATB1Q01826 763 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 NRG1Q02297 640 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CCDC15Q0P6D6 951 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 SIM2Q14190 667 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CSRP2Q16527 193 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 SMTNL2Q2TAL5 461 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 FUT11Q495W5 492 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 KCNT1Q5JUK3 1230 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RABGAP1LQ5R372 815 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 EGFLAMQ63HQ2 1017 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 SCYL2Q6P3W7 929 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF783Q6ZMS7 281 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 TFAP2DQ7Z6R9 452 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ADIPOR2Q86V24 386 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ALYREFQ86V81 257 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 NLRP14Q86W24 1093 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 TP53INP2Q8IXH6 220 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 APCDD1Q8J025 514 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 AHI1Q8N157 1196 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ZNF513Q8N8E2 541 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 IL17RCQ8NAC3 791 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 NETO2Q8NC67 525 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 HJURPQ8NCD3 748 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 TSTD1Q8NFU3 115 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CADM4Q8NFZ8 388 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RPLP0P6Q8NHW5 317 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 TPCN2Q8NHX9 752 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 FIBINQ8TAL6 211 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ACTRT1Q8TDG2 376 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 AENQ8WTP8 325 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 DDI1Q8WTU0 396 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CTNNBL1Q8WYA6 563 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RFFLQ8WZ73 363 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 P3H4Q92791 437 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 FOXJ1Q92949 421 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RPRD1AQ96P16 312 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 PSMB7Q99436 277 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 MFRPQ9BY79 579 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 KLC2Q9H0B6 622 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 CD248Q9HCU0 757 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 MRPL47Q9HD33 250 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 GDF3Q9NR23 364 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ABCB8Q9NUT2 735 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ETNK2Q9NVF9 386 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 KLHL11Q9NVR0 708 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 ELOVL2Q9NXB9 296 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 GOLGA6AQ9NYA3 693 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 UVRAGQ9P2Y5 699 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 THAP10Q9P2Z0 257 aaPredicted RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 SUN2Q9UH99 717 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 RAPGEFL1Q9UHV5 662 aa5.38□□□□□ -1.55
SHMT1-211ENST00000618902 SMG5Q9UPR3 1016 aaKnown RBP5.38□□□□□ -1.55
SHMT1-211ENST00000618902 OR51B4Q9Y5P0 310 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms