RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	PRR23B	Q6ZRT6	265 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	ZNF354C	Q86Y25	554 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	MAP7D3	Q8IWC1	876 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	SUMF1	Q8NBK3	374 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	KCTD6	Q8NC69	237 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	CCDC114	Q96M63	670 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	DESI2	Q9BSY9	194 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	CEP44	Q9C0F1	390 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	RAB23	Q9ULC3	237 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	ANKRD36	A6QL64	1941 aa		18.78	■□□□□ 0.6
CADM1-222	ENST00000616271	ARHGAP42	A6NI28	874 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ALOX15B	O15296	676 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	SMAD6	O43541	496 aa	Known RBP	18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	SPOP	O43791	374 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ACADM	P11310	421 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	VAV1	P15498	845 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	COMT	P21964	271 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	AMPD1	P23109	780 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	SERPINB6	P35237	376 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	RPS14	P62263	151 aa	Known RBP	18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ZFYVE27	Q5T4F4	411 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271		Q6ZVU0	165 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	CACUL1	Q86Y37	369 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	LRRC8A	Q8IWT6	810 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ARHGAP12	Q8IWW6	846 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	RHOT1	Q8IXI2	618 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	STK40	Q8N2I9	435 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	NPW	Q8N729	165 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	TPCN2	Q8NHX9	752 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	CASKIN2	Q8WXE0	1202 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	RLN3	Q8WXF3	142 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	OR8D1	Q8WZ84	308 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	CELF6	Q96J87	481 aa	Known RBP	18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ZC3H10	Q96K80	434 aa	Known RBP	18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	CALN1	Q9BXU9	219 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	LACRT	Q9GZZ8	138 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ITM2C	Q9NQX7	267 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	KLHL11	Q9NVR0	708 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	SALL4	Q9UJQ4	1053 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	SCML1	Q9UN30	329 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	ALG6	Q9Y672	507 aa		18.77	■□□□□ 0.6
CADM1-222	ENST00000616271	IGHV1OR15-9	A0A0B4J2B8	117 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	PRR23A	A6NEV1	266 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	ZNF487	B1APH4	448 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271		K7ERQ8	282 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	PSTPIP1	O43586	416 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	CD160	O95971	181 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	IGLV3-19	P01714	112 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	DNTT	P04053	509 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	CD48	P09326	243 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	IL4R	P24394	825 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	MMRN1	Q13201	1228 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	PLK5	Q496M5	336 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	TTC31	Q49AM3	519 aa	Predicted RBP	18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	SLC36A4	Q6YBV0	504 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	DSG4	Q86SJ6	1040 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	KBTBD6	Q86V97	674 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	VSIG1	Q86XK7	387 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	PCDH20	Q8N6Y1	951 aa	Known RBP	18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	ISG20	Q96AZ6	181 aa	Known RBP	18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	FAF2	Q96CS3	445 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	FAM129B	Q96TA1	746 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	SLC39A8	Q9C0K1	460 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	CD93	Q9NPY3	652 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	DDX56	Q9NY93	547 aa	Known RBP	18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	CYP8B1	Q9UNU6	501 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	INVS	Q9Y283	1065 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	FARP1	Q9Y4F1	1045 aa	Predicted RBP	18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	NUMA1	Q14980	2115 aa		18.76	■□□□□ 0.59
CADM1-222	ENST00000616271	BUB1	O43683	1085 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	NRDC	O43847	1150 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	ADH1B	P00325	375 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	BCKDHB	P21953	392 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	KDELR1	P24390	212 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	OXTR	P30559	389 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	PAPOLA	P51003	745 aa	Known RBP	18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	TPMT	P51580	245 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	KIF5A	Q12840	1032 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	ELF2	Q15723	593 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	CST6	Q15828	149 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	INO80D	Q53TQ3	878 aa	Predicted RBP	18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	PMS2CL	Q68D20	193 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	LAIR1	Q6GTX8	287 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	DAAM2	Q86T65	1068 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	FAM160A2	Q8N612	972 aa	Predicted RBP	18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	DUSP15	Q9H1R2	295 aa	Predicted RBP	18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	PDF	Q9HBH1	243 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	ETNK2	Q9NVF9	386 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	MBD1	Q9UIS9	605 aa	Predicted RBP	18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	FCF1	Q9Y324	198 aa	Known RBP	18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	MFHAS1	Q9Y4C4	1052 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	HYOU1	Q9Y4L1	999 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	ACTL7A	Q9Y615	435 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	DUSP10	Q9Y6W6	482 aa		18.75	■□□□□ 0.59
CADM1-222	ENST00000616271	LRRD1	A4D1F6	860 aa		18.74	■□□□□ 0.59
CADM1-222	ENST00000616271	MCF2L	O15068	1137 aa		18.74	■□□□□ 0.59
CADM1-222	ENST00000616271	PRAMEF11	O60813	436 aa		18.74	■□□□□ 0.59
CADM1-222	ENST00000616271	ZNF821	O75541	412 aa	Predicted RBP	18.74	■□□□□ 0.59
CADM1-222	ENST00000616271	RHOBTB1	O94844	696 aa		18.74	■□□□□ 0.59
CADM1-222	ENST00000616271	KRT1	P04264	644 aa		18.74	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms