RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 CWH43Q9H720 699 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 USP29Q9HBJ7 922 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 OSGEPQ9NPF4 335 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TBC1D23Q9NUY8 699 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 SIRT5Q9NXA8 310 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 PFDN2Q9UHV9 154 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TMEM59LQ9UK28 342 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TFR2Q9UP52 801 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 SLC8A2Q9UPR5 921 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ATP11BQ9Y2G3 1177 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ANGPTL3Q9Y5C1 460 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 SF3B1O75533 1304 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS11-206ENST00000614944 H7C0C1 242 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 M0QYV0 167 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 CD19P15391 556 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 GM2AP17900 193 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 CYP2C18P33260 490 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 RPS3AP61247 264 aaKnown RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 NFE2Q16621 373 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 SMU1Q2TAY7 513 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 HABP4Q5JVS0 413 aaKnown RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 CLVS2Q5SYC1 327 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 C6orf132Q5T0Z8 1188 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 LRRC74BQ6ZQY2 392 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 PAQR9Q6ZVX9 377 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 SLC26A9Q7LBE3 791 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 UBL4BQ8N7F7 174 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 CCDC89Q8N998 374 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 SP7Q8TDD2 431 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 FAM193BQ96PV7 902 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 C11orf84Q9BUA3 381 aaPredicted RBP8.98□□□□□ -0.97
VPS11-206ENST00000614944 MARCH5Q9NX47 278 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 RRN3Q9NYV6 651 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 GGT7Q9UJ14 662 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ADAM28Q9UKQ2 775 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 ALG6Q9Y672 507 aa8.98□□□□□ -0.97
VPS11-206ENST00000614944 TK2O00142 265 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 BUB1O43683 1085 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 POMCP01189 267 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CCNB1P14635 433 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 NPR3P17342 541 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 PTPN9P43378 593 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 TMPRSS15P98073 1019 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CFAP221Q4G0U5 840 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 AGBL2Q5U5Z8 902 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 PPP1R21Q6ZMI0 780 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 ACOT1Q86TX2 421 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 DCP1BQ8IZD4 617 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 CPSF7Q8N684 471 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 C12orf50Q8NA57 414 aaPredicted RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 FAM13CQ8NE31 585 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 ELMO3Q96BJ8 720 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 SMARCD1Q96GM5 515 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 ARMC7Q9H6L4 198 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 VPS51Q9UID3 782 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 RPL26L1Q9UNX3 145 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 ARHGAP10A1A4S6 786 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 VILLO15195 856 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 B3GAT3O94766 335 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CAPN1P07384 714 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 ABCB4P21439 1286 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CREMQ03060 361 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CHRNEQ04844 493 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 KDSRQ06136 332 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 AP1B1Q10567 949 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 C16orf72Q14CZ0 275 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 MAPRE2Q15555 327 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 PPP6R3Q5H9R7 873 aaPredicted RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 DNAJC24Q6P3W2 148 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 PSRC1Q6PGN9 363 aaPredicted RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 RBM44Q6ZP01 1051 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 C4orf50Q6ZRC1 276 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 HEATR4Q86WZ0 1026 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 PSTKQ8IV42 348 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 KATNAL2Q8IYT4 538 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 IPCEF1Q8WWN9 437 aaPredicted RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 CENPIQ92674 756 aaPredicted RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 UTP4Q969X6 686 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 CPXM1Q96SM3 734 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 B3GNT5Q9BYG0 378 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CD93Q9NPY3 652 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CRTAC1Q9NQ79 661 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 HPS4Q9NQG7 708 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 METTL5Q9NRN9 209 aaKnown RBP8.97□□□□□ -0.97
VPS11-206ENST00000614944 IL37Q9NZH6 218 aa8.97□□□□□ -0.97
VPS11-206ENST00000614944 CASTOR2A6NHX0 329 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 NDC80O14777 642 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 NRP1O14786 923 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 SUN1O94901 812 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 ENDOD1O94919 500 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 SHBGP04278 402 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 GALTP07902 379 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 LAG3P18627 525 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 LMO2P25791 158 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 SLC6A3Q01959 620 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 TAZQ16635 292 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 TIGD2Q4W5G0 525 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 KIAA0319Q5VV43 1072 aa8.96□□□□□ -0.97
VPS11-206ENST00000614944 DENND2CQ68D51 928 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms