RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 LPCAT1Q8NF37 534 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 RFWD2Q8NHY2 731 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NAT14Q8WUY8 206 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ZNF75CPQ92670 426 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 HSPBAP1Q96EW2 488 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TRIM62Q9BVG3 475 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TRAIPQ9BWF2 469 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ZDHHC18Q9NUE0 388 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ARHGAP10A1A4S6 786 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 BOLA2-SMG1P6H3BVE0 249 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ZFXP17010 805 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 GLRBP48167 497 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 MAP3K10Q02779 954 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ATP1A4Q13733 1029 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 RASA2Q15283 850 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TFDP3Q5H9I0 405 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 KRT80Q6KB66 452 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 C16orf46Q6P387 395 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 DOK6Q6PKX4 331 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 PTAR1Q7Z6K3 402 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 LRGUKQ96M69 825 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 FAM111AQ96PZ2 611 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TMEM209Q96SK2 561 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ECSITQ9BQ95 431 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 EBF3Q9H4W6 596 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 MANSC1Q9H8J5 431 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 PRKAG3Q9UGI9 489 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 DNPEPQ9ULA0 475 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NCF1BA6NI72 391 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NCF1CA8MVU1 366 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NEDD8-MDP1E9PL57 170 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 CHRNA1P02708 482 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NCF1P14598 390 aaPredicted RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ANPEPP15144 967 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 NELFEP18615 380 aaKnown RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 ITIH2P19823 946 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 SFSWAPQ12872 951 aaKnown RBP11.04□□□□□ -0.64
FAM3A-221ENST00000612856 GPM6BQ13491 265 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 TAS1R3Q7RTX0 852 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 SLC22A17Q8WUG5 538 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 GPR88Q9GZN0 384 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 MIOSQ9NXC5 875 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 CFAP97Q9P2B7 532 aa11.04□□□□□ -0.64
FAM3A-221ENST00000612856 A0A0U1RQF3 1178 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 YJEFN3A6XGL0 299 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 FCHO1O14526 889 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SH3BGRLO75368 114 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 F9P00740 461 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 HOXC6P09630 235 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 RBL1P28749 1068 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SKIV2L2P42285 1042 aaKnown RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SLC11A1P49279 550 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 MAMLD1Q13495 774 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SOWAHAQ2M3V2 549 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SGO1Q5FBB7 561 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 ANGPTL8Q6UXH0 198 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 RIPOR1Q6ZS17 1223 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SLC9A9Q8IVB4 645 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 HES6Q96HZ4 224 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SNRNP25Q9BV90 132 aaKnown RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 TMPRSS4Q9NRS4 437 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 GTSE1Q9NYZ3 720 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 A0A1W2PPM1 405 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 TRIM43BA6NCK2 446 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 RFXAPO00287 272 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 COPEO14579 308 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 NDUFS3O75489 264 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 ERBB2P04626 1255 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 PSMD7P51665 324 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 WDR4P57081 412 aaKnown RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 TAS2R40P59535 323 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 PHEXP78562 749 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SOX4Q06945 474 aaPredicted RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 TCHHL1Q5QJ38 904 aaPredicted RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 MARC1Q5VT66 337 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 C11orf63Q6NUN7 778 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SERPINA13PQ6UXR4 307 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 ASRGL1Q7L266 308 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 DCUN1D1Q96GG9 259 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 BRD9Q9H8M2 597 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 GRHL1Q9NZI5 618 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 CDH9Q9ULB4 789 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 LTBP1Q14766 1721 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 TBL1XO60907 577 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 KRT37O76014 449 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 IL1BP01584 269 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 S100BP04271 92 aaPredicted RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 CYBAP13498 195 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 NRIP1P48552 1158 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 SERPINB8P50452 374 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 NRLP54845 237 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 NOMO3P69849 1222 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 DCTN2Q13561 401 aaKnown RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 KIAA1324Q6UXG2 1013 aaKnown RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 TRPV1Q8NER1 839 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 WNT8BQ93098 351 aa11.03□□□□□ -0.64
FAM3A-221ENST00000612856 FCRL2Q96LA5 508 aaPredicted RBP11.03□□□□□ -0.64
FAM3A-221ENST00000612856 FICDQ9BVA6 458 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms