RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SLC35G2Q8TBE7 412 aa14.59□□□□□ -0.07
HDDC2-209ENST00000609477 RFFLQ8WZ73 363 aa14.59□□□□□ -0.07
HDDC2-209ENST00000609477 TOE1Q96GM8 510 aaKnown RBP14.59□□□□□ -0.07
HDDC2-209ENST00000609477 CALR3Q96L12 384 aaKnown RBP14.59□□□□□ -0.07
HDDC2-209ENST00000609477 PACSIN1Q9BY11 444 aa14.59□□□□□ -0.07
HDDC2-209ENST00000609477 ARRDC1-AS1Q9H2J1 176 aa14.59□□□□□ -0.07
HDDC2-209ENST00000609477 PABPC3Q9H361 631 aaKnown RBP14.59□□□□□ -0.07
HDDC2-209ENST00000609477 SEMA4GQ9NTN9 838 aa14.59□□□□□ -0.07
HDDC2-209ENST00000609477 SPTLC3Q9NUV7 552 aa14.59□□□□□ -0.07
HDDC2-209ENST00000609477 NYNRINQ9P2P1 1898 aaKnown RBP14.59□□□□□ -0.07
HDDC2-209ENST00000609477 CEP192Q8TEP8 1941 aa14.58□□□□□ -0.07
HDDC2-209ENST00000609477 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 PRR5-ARHGAP8B1AHC4 643 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 C1QTNF3-AMACRE9PGA6 284 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 H3BRJ5 948 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 MT-CO1P00395 513 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 KRT7P08729 469 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 RARAP10276 462 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 SDHBP21912 280 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 IL1R2P27930 398 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 SLC8A1P32418 973 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 MPLP40238 635 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 RECQLP46063 649 aaPredicted RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 DHPSP49366 369 aaPredicted RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 ARF5P84085 180 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 ARHGAP8P85298 464 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 CREB5Q02930 508 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 SLC25A11Q02978 314 aaKnown RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 LMNB2Q03252 620 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 ZNF33AQ06730 810 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 SPA17Q15506 151 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 CA9Q16790 459 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 PPP6R3Q5H9R7 873 aaPredicted RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 WDR45BQ5MNZ6 344 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 PEAR1Q5VY43 1037 aaPredicted RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 LYSMD4Q5XG99 296 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 CYP2U1Q7Z449 544 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 SYT12Q8IV01 421 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 MMAAQ8IVH4 418 aaKnown RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 TMEFF1Q8IYR6 380 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 ABCA7Q8IZY2 2146 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 DCLK2Q8N568 766 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 TMIEQ8NEW7 156 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 CEP76Q8TAP6 659 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 FAM71BQ8TC56 605 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 KCTD15Q96SI1 283 aaPredicted RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 BTBD1Q9H0C5 482 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 KDM4CQ9H3R0 1056 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 CWC15Q9P013 229 aaKnown RBP14.58□□□□□ -0.08
HDDC2-209ENST00000609477 PPM1HQ9ULR3 514 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 RALGAPA1Q6GYQ0 2036 aa14.58□□□□□ -0.08
HDDC2-209ENST00000609477 ARHGAP42A6NI28 874 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 GOLGA6L6A8MZA4 724 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 RASA4BC9J798 803 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 SLC7A4O43246 635 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 RASA4O43374 803 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 IPO7O95373 1038 aaKnown RBP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 PRNPP04156 253 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 GOT1P17174 413 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 ERCC2P18074 760 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 ACVRL1P37023 503 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 SLC1A1P43005 524 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 MAGEA1P43355 309 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 HADHBP55084 474 aaKnown RBP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 SPEM2Q0P670 501 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 SERINC3Q13530 473 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 DPYSQ14117 519 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 PDK2Q15119 407 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 C22orf39Q6P5X5 142 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 Q6ZVU0 165 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 POLNQ7Z5Q5 900 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 MAP7D3Q8IWC1 876 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 STK40Q8N2I9 435 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 OR2A12Q8NGT7 310 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 FAM131CQ96AQ9 280 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 ERLEC1Q96DZ1 483 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 LRIG1Q96JA1 1093 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 BTBD6Q96KE9 485 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 OMDQ99983 421 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 MTG2Q9H4K7 406 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 NOL6Q9H6R4 1146 aaKnown RBP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 LRRC19Q9H756 370 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 GPATCH2LQ9NWQ4 482 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 FBXL12Q9NXK8 326 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 SUSD2Q9UGT4 822 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 EVLQ9UI08 416 aaPredicted RBP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 NUP205Q92621 2012 aa14.57□□□□□ -0.08
HDDC2-209ENST00000609477 EP300Q09472 2414 aaPredicted RBP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 TNRC6BQ9UPQ9 1833 aaKnown RBP14.57□□□□□ -0.08
HDDC2-209ENST00000609477 METTL12A8MUP2 240 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 MID1O15344 667 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 SMAD6O43541 496 aaKnown RBP14.56□□□□□ -0.08
HDDC2-209ENST00000609477 CD160O95971 181 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 IL1BP01584 269 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 GLDCP23378 1020 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 SERPINB6P35237 376 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 PTGER3P43115 390 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 CARD16Q5EG05 197 aa14.56□□□□□ -0.08
HDDC2-209ENST00000609477 KCNT1Q5JUK3 1230 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms