RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PLK4O00444 970 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 RTN2O75298 545 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 TBC1D3HP0C7X1 549 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 RRM1P23921 792 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 HDAC4P56524 1084 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 FAM193AP78312 1265 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 GNA12Q03113 381 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 TRIP6Q15654 476 aaKnown RBP18.53■□□□□ 0.56
CCDC12-208ENST00000603885 POM121L1PQ3SYA9 428 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 MANEALQ5VSG8 457 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 TBC1D3GQ6DHY5 549 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 TBC1D3CQ6IPX1 549 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 RWDD4Q6NW29 188 aaKnown RBP18.53■□□□□ 0.56
CCDC12-208ENST00000603885 C22orf39Q6P5X5 142 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 LINGO4Q6UY18 593 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 DRC7Q8IY82 874 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 TBC1D3Q8IZP1 549 aaPredicted RBP18.53■□□□□ 0.56
CCDC12-208ENST00000603885 SETD7Q8WTS6 366 aaKnown RBP18.53■□□□□ 0.56
CCDC12-208ENST00000603885 RETREG1Q9H6L5 497 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 EBF2Q9HAK2 575 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 ATP13A1Q9HD20 1204 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 AASDHPPTQ9NRN7 309 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 WASF3Q9UPY6 502 aa18.53■□□□□ 0.56
CCDC12-208ENST00000603885 PLXNA2O75051 1894 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 VILLO15195 856 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 SMAD6O43541 496 aaKnown RBP18.52■□□□□ 0.56
CCDC12-208ENST00000603885 PLRG1O43660 514 aaKnown RBP18.52■□□□□ 0.56
CCDC12-208ENST00000603885 TRIM16O95361 564 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 RHOQP17081 205 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 GLDCP23378 1020 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 CHRNA3P32297 505 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 ETFBP38117 255 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 CTSKP43235 329 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 RECQLP46063 649 aaPredicted RBP18.52■□□□□ 0.56
CCDC12-208ENST00000603885 SLC20A2Q08357 652 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 CNTN1Q12860 1018 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 SUZ12Q15022 739 aaKnown RBP18.52■□□□□ 0.56
CCDC12-208ENST00000603885 AGBL4Q5VU57 503 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 WDR59Q6PJI9 974 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 CCDC185Q8N715 623 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 OR2A12Q8NGT7 310 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 NTAN1Q96AB6 310 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 PCOLCE2Q9UKZ9 415 aa18.52■□□□□ 0.56
CCDC12-208ENST00000603885 CABIN1Q9Y6J0 2220 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 FLRT2O43155 660 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 LATO43561 262 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 ZMPSTE24O75844 475 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 TOP3BO95985 862 aaKnown RBP18.51■□□□□ 0.55
CCDC12-208ENST00000603885 PRNPP04156 253 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 PLEKP08567 350 aaPredicted RBP18.51■□□□□ 0.55
CCDC12-208ENST00000603885 SPINK2P20155 84 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 TNFAIP3P21580 790 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 MAPKAPK2P49137 400 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 SERPINH1P50454 418 aaKnown RBP18.51■□□□□ 0.55
CCDC12-208ENST00000603885 CCT8P50990 548 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 PPP2CBP62714 309 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 PPP2CAP67775 309 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 CCDC15Q0P6D6 951 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 ZNF423Q2M1K9 1284 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 ACAD10Q6JQN1 1059 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 PPP1R2P3Q6NXS1 205 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 IRF2BP2Q7Z5L9 587 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 PRPF39Q86UA1 669 aaKnown RBP18.51■□□□□ 0.55
CCDC12-208ENST00000603885 TMIEQ8NEW7 156 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 BAP1Q92560 729 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 TBC1D31Q96DN5 1066 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 SERAC1Q96JX3 654 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 MCEEQ96PE7 176 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 SCNM1Q9BWG6 230 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 CEP44Q9C0F1 390 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 DYRK4Q9NR20 520 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 TMEM248Q9NWD8 314 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 FRYQ5TBA9 3013 aa18.51■□□□□ 0.55
CCDC12-208ENST00000603885 TMEM131Q92545 1883 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 CACNA1BQ00975 2339 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 A0A1W2PQC6 194 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 TCRBV5S1A1TA0A578 114 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 FAM72CH0Y354 149 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 H0Y8X5 98 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 KPNA3O00505 521 aaPredicted RBP18.5■□□□□ 0.55
CCDC12-208ENST00000603885 KCNK3O14649 394 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 CCP110O43303 1012 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 DFNA5O60443 496 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 CBFA2T3O75081 653 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 LRIG2O94898 1065 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 CTSLP07711 333 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 DESP17661 470 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 CD38P28907 300 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 NUDT1P36639 197 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 ZNF143P52747 638 aaPredicted RBP18.5■□□□□ 0.55
CCDC12-208ENST00000603885 SCAPQ12770 1279 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 SLC45A4Q5BKX6 768 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 KCNT1Q5JUK3 1230 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 FAM72AQ5TYM5 149 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 FAM72DQ6L9T8 149 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 DCUN1D2Q6PH85 259 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 DBX2Q6ZNG2 339 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 SLFN11Q7Z7L1 901 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 NLRP14Q86W24 1093 aa18.5■□□□□ 0.55
CCDC12-208ENST00000603885 TRIM69Q86WT6 500 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms