RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 GRM3Q14832 879 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 NCBP2-AS2Q69YL0 99 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 C22orf39Q6P5X5 142 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SPOCD1Q6ZMY3 1216 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 BBS12Q6ZW61 710 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 BBS5Q8N3I7 341 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ATPAF2Q8N5M1 289 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 NPWQ8N729 165 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 OR7D4Q8NG98 312 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 FRS2Q8WU20 508 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 RAPGEF5Q92565 580 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 HDAC11Q96DB2 347 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 LRIG1Q96JA1 1093 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TSGA13Q96PP4 275 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MAK16Q9BXY0 300 aaKnown RBP9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MAGEB5Q9BZ81 275 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PDFQ9HBH1 243 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CACNA2D2Q9NY47 1150 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TRIM10Q9UDY6 481 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 HCN2Q9UL51 889 aa9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CACNA1IQ9P0X4 2223 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 NUP205Q92621 2012 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 hCG_1818297A0A087WSY0 165 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 APOC4-APOC2K7ER74 178 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 K7ESF4 209 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PPP1R12AO14974 1030 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MTSS1O43312 755 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 KIF5CO60282 957 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ZNF217O75362 1048 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ADH1BP00325 375 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 GSRP00390 522 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 IGLV3-19P01714 112 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 APOC2P02655 101 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SRCP12931 536 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 AMPD1P23109 780 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 GARSP41250 739 aaKnown RBP9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 RECQLP46063 649 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 RENBPP51606 427 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PTPN5P54829 565 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ARF5P84085 180 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SATB1Q01826 763 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PDK1Q15118 436 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ANGPT1Q15389 498 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ATP13A4Q4VNC1 1196 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 RALGPS1Q5JS13 557 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MEI1Q5TIA1 1274 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PKN3Q6P5Z2 889 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 WDR5BQ86VZ2 330 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 LONP2Q86WA8 852 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CPNE8Q86YQ8 564 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CCDC50Q8IVM0 306 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SFTPA1Q8IWL2 248 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PQLC3Q8N755 202 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PLD5Q8N7P1 536 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ATP11CQ8NB49 1132 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 OR2T3Q8NH03 318 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 NSMCE1Q8WV22 266 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 HMCESQ96FZ2 354 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SPON2Q9BUD6 331 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 RSPH9Q9H1X1 276 aaPredicted RBP9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 GOLPH3Q9H4A6 298 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SP110Q9HB58 689 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 IPO11Q9UI26 975 aaKnown RBP9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TPX2Q9ULW0 747 aaKnown RBP9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 JRKLQ9Y4A0 524 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CACNA1HO95180 2353 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ATG2BQ96BY7 2078 aa9.67□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TCRBV21S2A2A0A5A6 115 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 WASH3PC4AMC7 463 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MCF2LO15068 1137 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MFSD11O43934 449 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SNAP91O60641 907 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MAFKO60675 156 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TJP3O95049 919 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 FTCDO95954 541 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PRNPP04156 253 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PRKCHP24723 683 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CCNCP24863 283 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ACVRL1P37023 503 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CTSOP43234 321 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CSNK1DP48730 415 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MARCKSL1P49006 195 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 STK19P49842 368 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 PAPOLAP51003 745 aaKnown RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SNRPD1P62314 119 aaKnown RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 CCDC15Q0P6D6 951 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MMRN1Q13201 1228 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 XRCC4Q13426 336 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 HNRNPDQ14103 355 aaKnown RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 DLG2Q15700 870 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TTC31Q49AM3 519 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 SEL1L2Q5TEA6 688 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 EMC10Q5UCC4 262 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 FAM46CQ5VWP2 391 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 ZNF776Q68DI1 518 aaPredicted RBP9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 MFSD7Q6UXD7 560 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 TMEM92Q6UXU6 159 aa9.66□□□□□ -0.86
SQSTM1P1-201ENST00000603451 USP30Q70CQ3 517 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms