RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 WASF3Q9UPY6 502 aa20.65■□□□□ 0.9
CIRBP-239ENST00000592467 A0A1B0GVT2 93 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 A0A1W2PPC4 97 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 SERPINC1P01008 464 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 RHOQP17081 205 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 ACVRL1P37023 503 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 CSNK1EP49674 416 aaKnown RBP20.64■□□□□ 0.89
CIRBP-239ENST00000592467 MAMLD1Q13495 774 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 ASIC2Q16515 512 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 KCNT1Q5JUK3 1230 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 PLEKHA7Q6IQ23 1121 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 DRC7Q8IY82 874 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 PYROXD2Q8N2H3 581 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 ATP11CQ8NB49 1132 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 PIP4K2CQ8TBX8 421 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 VOPP1Q96AW1 172 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 CNPY3Q9BT09 278 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 RETREG1Q9H6L5 497 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 ACTL7AQ9Y615 435 aa20.64■□□□□ 0.89
CIRBP-239ENST00000592467 KNL1Q8NG31 2342 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 FAM47DPA6NHR8 397 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 CCR5P51681 352 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 CLCN6P51797 869 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 AFF3P51826 1226 aaKnown RBP20.63■□□□□ 0.89
CIRBP-239ENST00000592467 ZNF252P-AS1Q0IIN9 211 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 SFSWAPQ12872 951 aaKnown RBP20.63■□□□□ 0.89
CIRBP-239ENST00000592467 SLC14A1Q13336 389 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 ZSCAN23Q3MJ62 389 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 AGBL4Q5VU57 503 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 SFMBT2Q5VUG0 894 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 C22orf39Q6P5X5 142 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 LAYNQ6UX15 382 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 SLFN11Q7Z7L1 901 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 ARFGAP1Q8N6T3 406 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 CHST14Q8NCH0 376 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 TBC1D31Q96DN5 1066 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 NOL6Q9H6R4 1146 aaKnown RBP20.63■□□□□ 0.89
CIRBP-239ENST00000592467 FZD10Q9ULW2 581 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 SPEGQ15772 3267 aa20.63■□□□□ 0.89
CIRBP-239ENST00000592467 LRRC72A6NJI9 287 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 TMCO5BA8MYB1 307 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 WNT9AO14904 365 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 SLC7A4O43246 635 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 ATMINO43313 823 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-239ENST00000592467 LATO43561 262 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 PLRG1O43660 514 aaKnown RBP20.62■□□□□ 0.89
CIRBP-239ENST00000592467 RTN2O75298 545 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 GZMAP12544 262 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 L1CAMP32004 1257 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 GRIA4P48058 902 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 MAPKAPK2P49137 400 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 SERPINH1P50454 418 aaKnown RBP20.62■□□□□ 0.89
CIRBP-239ENST00000592467 TAS2R38P59533 333 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 PPP2CBP62714 309 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 PPP2CAP67775 309 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 FAM193AP78312 1265 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 CNTN1Q12860 1018 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 KIF19Q2TAC6 998 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 HGSNATQ68CP4 663 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.62■□□□□ 0.89
CIRBP-239ENST00000592467 DSG4Q86SJ6 1040 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 OR14C36Q8NHC7 312 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 ARHGEF2Q92974 986 aaKnown RBP20.62■□□□□ 0.89
CIRBP-239ENST00000592467 SPON2Q9BUD6 331 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 ATP13A1Q9HD20 1204 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 ARHGAP20Q9P2F6 1191 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 FNDC3AQ9Y2H6 1198 aaKnown RBP20.62■□□□□ 0.89
CIRBP-239ENST00000592467 SNX11Q9Y5W9 270 aa20.62■□□□□ 0.89
CIRBP-239ENST00000592467 CXorf51AA0A1B0GTR3 108 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 CBX4O00257 560 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 WNT1P04628 370 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 ZNF883P0CG24 379 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 SKILP12757 684 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 CHRNA3P32297 505 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 SHC2P98077 582 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 HLA-BQ31612 363 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 POM121L1PQ3SYA9 428 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 FAM46CQ5VWP2 391 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 RWDD4Q6NW29 188 aaKnown RBP20.61■□□□□ 0.89
CIRBP-239ENST00000592467 PPP1R2P3Q6NXS1 205 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 DBX2Q6ZNG2 339 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 TMIEQ8NEW7 156 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 ARRDC3Q96B67 414 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 SLC6A18Q96N87 628 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 CAMK1GQ96NX5 476 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 TRIM7Q9C029 511 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 TNKS2Q9H2K2 1166 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 KDM4CQ9H3R0 1056 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 GAREM1Q9H706 876 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 DNAI1Q9UI46 699 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 ANKRD6Q9Y2G4 727 aa20.61■□□□□ 0.89
CIRBP-239ENST00000592467 A0A1W2PQJ5 194 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 A0A1W2PR77 199 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 TMEM191CA6NGB0 347 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 C1QTNF3-AMACRE9PGA6 284 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 BNIP3LO60238 219 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 SH3BP5O60239 455 aa20.6■□□□□ 0.89
CIRBP-239ENST00000592467 FTLP02792 175 aaPredicted RBP20.6■□□□□ 0.89
CIRBP-239ENST00000592467 RACK1P63244 317 aaKnown RBP20.6■□□□□ 0.89
CIRBP-239ENST00000592467 SLC20A2Q08357 652 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms