RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 PPHLN1Q8NEY8 458 aaKnown RBP3.79□□□□□ -1.8
SMAD4-207ENST00000589076 KCNJ9Q92806 393 aa3.79□□□□□ -1.8
SMAD4-207ENST00000589076 ATP2A3Q93084 1043 aa3.79□□□□□ -1.8
SMAD4-207ENST00000589076 GATA5Q9BWX5 397 aaPredicted RBP3.79□□□□□ -1.8
SMAD4-207ENST00000589076 TRIM31Q9BZY9 425 aa3.79□□□□□ -1.8
SMAD4-207ENST00000589076 CD207Q9UJ71 328 aa3.79□□□□□ -1.8
SMAD4-207ENST00000589076 PNMA2Q9UL42 364 aa3.79□□□□□ -1.8
SMAD4-207ENST00000589076 IGLV5-39A0A0G2JS06 123 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 NPIPB13A6NJU9 1138 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 NPIPB5A8MRT5 1133 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 HMGB1P1B2RPK0 211 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 NPIPB4C9JG80 1138 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 MCIDASD6RGH6 385 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 PEX12O00623 359 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 METTL18O95568 372 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 HLA-DQA2P01906 255 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 WEE2P0C1S8 567 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 AKR1A1P14550 325 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 PKMP14618 531 aaKnown RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 GSTM2P28161 218 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 AVPR2P30518 371 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 IDUAP35475 653 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 GPD2P43304 727 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 CPA2P48052 419 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 MVDP53602 400 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 ARHGAP8P85298 464 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 MPP1Q00013 466 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 ASIC2Q16515 512 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 ZNF474Q6S9Z5 364 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 DHRS13Q6UX07 377 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 UBE2Q1Q7Z7E8 422 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 TMEM200AQ86VY9 491 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 HEATR4Q86WZ0 1026 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 RHPN2Q8IUC4 686 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 FOXP4Q8IVH2 680 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 EXD3Q8N9H8 876 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 FAM47BQ8NA70 645 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 PCYOX1LQ8NBM8 494 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 BCAS4Q8TDM0 211 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 ST8SIA4Q92187 359 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 NCSTNQ92542 709 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 KAT2BQ92831 832 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 SKA1Q96BD8 255 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 CD180Q99467 661 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 MEIS3Q99687 375 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 HDHD5Q9BXW7 423 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 PAIP1Q9H074 479 aaKnown RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 OSBPL5Q9H0X9 879 aaPredicted RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 STN1Q9H668 368 aaKnown RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 PREBQ9HCU5 417 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 SELENONQ9NZV5 590 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 CNOT7Q9UIV1 285 aaKnown RBP3.78□□□□□ -1.8
SMAD4-207ENST00000589076 SLC25A13Q9UJS0 675 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 DTX4Q9Y2E6 619 aa3.78□□□□□ -1.8
SMAD4-207ENST00000589076 SH2D7A6NKC9 451 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 C4orf47A7E2U8 309 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 GTPBP1O00178 669 aaKnown RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 HNRNPA1P09651 372 aaKnown RBP eCLIP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 CYP4B1P13584 511 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ARSAP15289 507 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 TNFAIP3P21580 790 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 PRKCHP24723 683 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 LIFRP42702 1097 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 SOX2P48431 317 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 NR1H2P55055 460 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ZXDBP98169 803 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 B4GALNT1Q00973 533 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 CFHR1Q03591 330 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 CAMK1Q14012 370 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 NFIL3Q16649 462 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 AWAT1Q58HT5 328 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ZNF793Q6ZN11 406 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 RSRC2Q7L4I2 434 aaKnown RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 MAATS1Q7Z4T9 603 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 TFAP2DQ7Z6R9 452 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 GALNT7Q86SF2 657 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 SCN4BQ8IWT1 228 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 PAQR4Q8N4S7 273 aaPredicted RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 TCP11L2Q8N4U5 519 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ZCCHC10Q8TBK6 192 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 NOC3LQ8WTT2 800 aaKnown RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 RFFLQ8WZ73 363 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 RRP36Q96EU6 259 aaKnown RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ZNF347Q96SE7 839 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 MRPL44Q9H9J2 332 aaKnown RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 TXNRD2Q9NNW7 524 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ALKBH4Q9NXW9 302 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 IPO11Q9UI26 975 aaKnown RBP3.77□□□□□ -1.81
SMAD4-207ENST00000589076 TNFSF13BQ9Y275 285 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 PKP3Q9Y446 797 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 CYP46A1Q9Y6A2 500 aa3.77□□□□□ -1.81
SMAD4-207ENST00000589076 ITIH6Q6UXX5 1313 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 GOLGA6L10A0A0M3HER8 536 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 TMEM247A6NEH6 219 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 KCNJ18B7U540 433 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 RRHO14718 337 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 SYN3O14994 580 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 MBD4O95243 580 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 LYL1P12980 280 aa3.76□□□□□ -1.81
SMAD4-207ENST00000589076 RPS6KB1P23443 525 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms