RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 PDIK1LQ8N165 341 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 DDI1Q8WTU0 396 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 PABPC5Q96DU9 382 aaKnown RBP26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 WDR83Q9BRX9 315 aaKnown RBP26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 MLPHQ9BV36 600 aaPredicted RBP26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 FAM53CQ9NYF3 392 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 NINJ2Q9NZG7 142 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 LMCD1Q9NZU5 365 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 PLAAQ9Y263 795 aa26.54■■□□□ 1.84
SCAMP4-210ENST00000588555 H0Y626 953 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 FSHRP23945 695 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 IFNAR2P48551 515 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 PDIA2Q13087 525 aaKnown RBP26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 ADAM15Q13444 863 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 KCTD11Q693B1 232 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 TPGS1Q6ZTW0 290 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 BHMTQ93088 406 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 GLOD4Q9HC38 313 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 KDELR3O43731 214 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 TTC4O95801 387 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 GRIA1P42261 906 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 NUMBP49757 651 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 MTM1Q13496 603 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 SLC29A2Q14542 456 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 KYNUQ16719 465 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 MARC1Q5VT66 337 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 FYB2Q5VWT5 728 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 RNF219Q5W0B1 726 aaPredicted RBP26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 IL31Q6EBC2 164 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 ZBTB9Q96C00 473 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 C9orf72Q96LT7 481 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 ZNF599Q96NL3 588 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 LRRC3BQ96PB8 259 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 FCRL5Q96RD9 977 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 KIF9Q9HAQ2 790 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 OR51B4Q9Y5P0 310 aa26.53■■□□□ 1.84
SCAMP4-210ENST00000588555 XIRP2A4UGR9 3374 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 AVILO75366 819 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 NUDT17P0C025 328 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 ZBED8Q8IZ13 594 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 AGGF1Q8N302 714 aaeCLIP26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 FGF13Q92913 245 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 OXNAD1Q96HP4 312 aaPredicted RBP26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 ATP13A1Q9HD20 1204 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 CLEC1BQ9P126 229 aa26.52■■□□□ 1.84
SCAMP4-210ENST00000588555 AP2A1O95782 977 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 GLDCP23378 1020 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 ETFBP38117 255 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 CDH18Q13634 790 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 TMCO4Q5TGY1 634 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 MFN1Q8IWA4 741 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 CELF5Q8N6W0 485 aaKnown RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 RSPRY1Q96DX4 576 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 ALG14Q96F25 216 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 SPON2Q9BUD6 331 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 MUC3BQ9H195 1237 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 TTYH1Q9H313 450 aaPredicted RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 ACBD3Q9H3P7 528 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 PLK2Q9NYY3 685 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 TBC1D14Q9P2M4 693 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 CLEC4EQ9ULY5 219 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 ERI2A8K979 691 aaKnown RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 SUN1O94901 812 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 HOXB8P17481 243 aaPredicted RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 MZF1P28698 734 aaPredicted RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 MMP13P45452 471 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 LMAN1P49257 510 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 OXCT1P55809 520 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 LBRQ14739 615 aaKnown RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 BBS9Q3SYG4 887 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 HP1BP3Q5SSJ5 553 aaPredicted RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 DENND2CQ68D51 928 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 LRIG3Q6UXM1 1119 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 LEKR1Q6ZMV7 388 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 OR2W6PQ8NHA6 318 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 NSMCE1Q8WV22 266 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 ASB16Q96NS5 453 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 FEM1AQ9BSK4 669 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 LINC00597Q9H2U6 94 aa26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 XAB2Q9HCS7 855 aaKnown RBP26.51■■□□□ 1.83
SCAMP4-210ENST00000588555 TRIOBPQ9H2D6 2365 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 ACSL3O95573 720 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 FAM78AQ5JUQ0 283 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 TMEM25Q86YD3 366 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 OTUB2Q96DC9 234 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 NT5MQ9NPB1 228 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 TTLL3Q9Y4R7 772 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 TEX264Q9Y6I9 313 aa26.5■■□□□ 1.83
SCAMP4-210ENST00000588555 PENKP01210 267 aaPredicted RBP26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 CYBBP04839 570 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 MLNP12872 115 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 FAM193AP78312 1265 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 PGBD5Q8N414 524 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 KIAA1958Q8N8K9 716 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 SPATA22Q8NHS9 363 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 FIBINQ8TAL6 211 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 GDE1Q9NZC3 331 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 ACTL7AQ9Y615 435 aa26.49■■□□□ 1.83
SCAMP4-210ENST00000588555 A0A1W2PPC1 479 aa26.48■■□□□ 1.83
SCAMP4-210ENST00000588555 ZMPSTE24O75844 475 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 625.7 ms