RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 CEP68Q76N32 757 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 ASCL5Q7RTU5 278 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 KBTBD6Q86V97 674 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 CACUL1Q86Y37 369 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 STK40Q8N2I9 435 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 NPWQ8N729 165 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 PRCCQ92733 491 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 CELF6Q96J87 481 aaKnown RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 DESI2Q9BSY9 194 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 SLC39A8Q9C0K1 460 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 ITM2CQ9NQX7 267 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 KLHL11Q9NVR0 708 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 DONSONQ9NYP3 566 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 USP36Q9P275 1121 aaKnown RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 RCOR3Q9P2K3 495 aaPredicted RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 SMG5Q9UPR3 1016 aaKnown RBP20.64■□□□□ 0.89
DDX39A-207ENST00000588542 HYOU1Q9Y4L1 999 aa20.64■□□□□ 0.89
DDX39A-207ENST00000588542 RALGAPA1Q6GYQ0 2036 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 IGHV1OR15-9A0A0B4J2B8 117 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 A0A0U1RQJ8 604 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 PRR23AA6NEV1 266 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 ZNF821O75541 412 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-207ENST00000588542 LMNAP02545 664 aaKnown RBP20.63■□□□□ 0.89
DDX39A-207ENST00000588542 COMTP21964 271 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 SLC1A1P43005 524 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 CLCN6P51797 869 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 KRT81Q14533 505 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 RETSATQ6NUM9 610 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 PRR23BQ6ZRT6 265 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 Q6ZVU0 165 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 NETO2Q8NC67 525 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 ZC3H10Q96K80 434 aaKnown RBP20.63■□□□□ 0.89
DDX39A-207ENST00000588542 DUSP15Q9H1R2 295 aaPredicted RBP20.63■□□□□ 0.89
DDX39A-207ENST00000588542 GOLPH3Q9H4A6 298 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 CYP8B1Q9UNU6 501 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 ALG6Q9Y672 507 aa20.63■□□□□ 0.89
DDX39A-207ENST00000588542 ZNF217O75362 1048 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 PDK2Q15119 407 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 LPAL2Q16609 132 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 PLK5Q496M5 336 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 ZNF776Q68DI1 518 aaPredicted RBP20.62■□□□□ 0.89
DDX39A-207ENST00000588542 C22orf39Q6P5X5 142 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 LEKR1Q6ZMV7 388 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 LRRC8AQ8IWT6 810 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 TP53INP2Q8IXH6 220 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 KCTD6Q8NC69 237 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 TPCN2Q8NHX9 752 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 RAPGEF5Q92565 580 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 HPCAL4Q9UM19 191 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 ZNF292O60281 2723 aa20.62■□□□□ 0.89
DDX39A-207ENST00000588542 BUB1O43683 1085 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 IGLV3-19P01714 112 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 KDELR1P24390 212 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 PAPOLAP51003 745 aaKnown RBP20.61■□□□□ 0.89
DDX39A-207ENST00000588542 TPMTP51580 245 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 BYSLQ13895 437 aaKnown RBP20.61■□□□□ 0.89
DDX39A-207ENST00000588542 ELAVL3Q14576 367 aaKnown RBP20.61■□□□□ 0.89
DDX39A-207ENST00000588542 LRRC38Q5VT99 294 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 C11orf63Q6NUN7 778 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 KIAA1328Q86T90 577 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 LZTR1Q8N653 840 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 OR2A12Q8NGT7 310 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 PCDH19Q8TAB3 1148 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 FAF2Q96CS3 445 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 SPACA7Q96KW9 195 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 ZNF670Q9BS34 389 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 CEP44Q9C0F1 390 aa20.61■□□□□ 0.89
DDX39A-207ENST00000588542 FCF1Q9Y324 198 aaKnown RBP20.61■□□□□ 0.89
DDX39A-207ENST00000588542 ZSCAN5CA6NGD5 496 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-207ENST00000588542 C3orf70A6NLC5 250 aaPredicted RBP20.6■□□□□ 0.89
DDX39A-207ENST00000588542 MCF2LO15068 1137 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 ACADMP11310 421 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 MRE11P49959 708 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 GEMIN4P57678 1058 aaKnown RBP20.6■□□□□ 0.89
DDX39A-207ENST00000588542 ZBTB16Q05516 673 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 CST6Q15828 149 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 ANKRD20A8PQ5CZ79 823 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 TMCO3Q6UWJ1 677 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 C11orf74Q86VG3 221 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 ZNF354CQ86Y25 554 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 MMAAQ8IVH4 418 aaKnown RBP20.6■□□□□ 0.89
DDX39A-207ENST00000588542 RHOT1Q8IXI2 618 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 CCDC112Q8NEF3 446 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 CALN1Q9BXU9 219 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 TNKS2Q9H2K2 1166 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 PDFQ9HBH1 243 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 TRIM10Q9UDY6 481 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 SARDHQ9UL12 918 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 ADGRG1Q9Y653 693 aa20.6■□□□□ 0.89
DDX39A-207ENST00000588542 RIF1Q5UIP0 2472 aaKnown RBP20.6■□□□□ 0.89
DDX39A-207ENST00000588542 ARHGAP42A6NI28 874 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 J3KR12 359 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 ALOX15BO15296 676 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 MID1O15344 667 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 ARHGAP6O43182 974 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 SPOPO43791 374 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 PRAMEF11O60813 436 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 RNASEH1O60930 286 aaKnown RBP20.59■□□□□ 0.89
DDX39A-207ENST00000588542 DNTTP04053 509 aa20.59■□□□□ 0.89
DDX39A-207ENST00000588542 CCZ1BP86790 482 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms