RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 PIAS1O75925 651 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 HDCP19113 662 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 CDC25CP30307 473 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 CRADDP78560 199 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 CDH17Q12864 832 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 TTC39BQ5VTQ0 682 aaPredicted RBP16.84■□□□□ 0.29
NFIX-210ENST00000588228 TXNDC8Q6A555 127 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 GAREM2Q75VX8 874 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 RTL10Q7L3V2 364 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 ARL14EPQ8N8R7 260 aaPredicted RBP16.84■□□□□ 0.29
NFIX-210ENST00000588228 SPATA22Q8NHS9 363 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 WBP2Q969T9 261 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 TTC17Q96AE7 1141 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 SLC22A12Q96S37 553 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 CYP2S1Q96SQ9 504 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 TRIM56Q9BRZ2 755 aaKnown RBP16.84■□□□□ 0.29
NFIX-210ENST00000588228 SLC25A51Q9H1U9 297 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 TRABDQ9H4I3 376 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 INTS9Q9NV88 658 aaKnown RBP16.84■□□□□ 0.29
NFIX-210ENST00000588228 UBP1Q9NZI7 540 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 ZNF180Q9UJW8 692 aa16.84■□□□□ 0.29
NFIX-210ENST00000588228 A0A1B0GVM2 712 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 MAGEB16A2A368 324 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 TCAF2A6NFQ2 919 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 LPXNO60711 386 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 PRAMEF11O60813 436 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 POLBP06746 335 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 DNAJB1P25685 340 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 ACVRL1P37023 503 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 CLCN4P51793 760 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 RPS24P62847 133 aaKnown RBP16.83■□□□□ 0.28
NFIX-210ENST00000588228 SPANXN3Q5MJ09 141 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 TRMT10BQ6PF06 316 aaKnown RBP16.83■□□□□ 0.28
NFIX-210ENST00000588228 ZNF771Q7L3S4 317 aaPredicted RBP16.83■□□□□ 0.28
NFIX-210ENST00000588228 CTAGE3PQ8IX95 158 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 HS6ST3Q8IZP7 471 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 PPM1NQ8N819 430 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 MZB1Q8WU39 189 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 PABPC5Q96DU9 382 aaKnown RBP16.83■□□□□ 0.28
NFIX-210ENST00000588228 ZNF599Q96NL3 588 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 GCNAQ96QF7 691 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 SMC6Q96SB8 1091 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 TBL1YQ9BQ87 522 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 C17orf80Q9BSJ5 609 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 IL22Q9GZX6 179 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 KCNK9Q9NPC2 374 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 CPQQ9Y646 472 aa16.83■□□□□ 0.28
NFIX-210ENST00000588228 MT-CYBP00156 380 aaPredicted RBP16.82■□□□□ 0.28
NFIX-210ENST00000588228 C1RP00736 705 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 RB1P06400 928 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 PFKLP17858 780 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 SLC7A9P82251 487 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 CYP4F8P98187 520 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 GNA12Q03113 381 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 PPARDQ03181 441 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 SLC10A7Q0GE19 358 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 MPP3Q13368 585 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 CRYMQ14894 314 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 PPM1LQ5SGD2 360 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 TMCO4Q5TGY1 634 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 ZNF449Q6P9G9 518 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 SETD3Q86TU7 594 aaPredicted RBP16.82■□□□□ 0.28
NFIX-210ENST00000588228 ADAMTS19Q8TE59 1207 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 ATXN2LQ8WWM7 1075 aaKnown RBP16.82■□□□□ 0.28
NFIX-210ENST00000588228 EPN3Q9H201 632 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 PDFQ9HBH1 243 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 SSU72Q9NP77 194 aaKnown RBP16.82■□□□□ 0.28
NFIX-210ENST00000588228 NT5MQ9NPB1 228 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 SMYD2Q9NRG4 433 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 NYNRINQ9P2P1 1898 aaKnown RBP16.82■□□□□ 0.28
NFIX-210ENST00000588228 PLXNA4Q9HCM2 1894 aa16.82■□□□□ 0.28
NFIX-210ENST00000588228 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 ILVBLA1L0T0 632 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 CXorf49A8MYA2 514 aaPredicted RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 PRPF4O43172 522 aaKnown RBP eCLIP16.81■□□□□ 0.28
NFIX-210ENST00000588228 GREM1O60565 184 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 USP1O94782 785 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 ADRA1AP35348 466 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 SLC18A1P54219 525 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 ZNF177Q13360 481 aaPredicted RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 NAB1Q13506 487 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 FRG1Q14331 258 aaKnown RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 LBRQ14739 615 aaKnown RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 Q6ZNB5 142 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 TMEM135Q86UB9 458 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 IPMKQ8NFU5 416 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 CDKL2Q92772 493 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 IMP4Q96G21 291 aaKnown RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 APOL2Q9BQE5 337 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 VPS45Q9NRW7 570 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 LSM7Q9UK45 103 aaKnown RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 SMG5Q9UPR3 1016 aaKnown RBP16.81■□□□□ 0.28
NFIX-210ENST00000588228 RPS6KL1Q9Y6S9 549 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 TRAV19A0A0A6YYK7 116 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 FAM237BA0A1B0GVD1 139 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 A0A1W2PPM1 405 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 CSPG5O95196 566 aa16.81■□□□□ 0.28
NFIX-210ENST00000588228 RHOCP08134 193 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms