RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PLLPQ9Y342 182 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MTCL1Q9Y4B5 1905 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 KCNN4O15554 427 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TBX18O95935 607 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 APOEP02649 317 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 IRS1P35568 1242 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SERPINB4P48594 390 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 EPHB3P54753 998 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 AIF1P55008 147 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 EFEMP1Q12805 493 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TBCCQ15814 346 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 LILRA6Q6PI73 481 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 BZW1Q7L1Q6 419 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PTCD3Q96EY7 689 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SERAC1Q96JX3 654 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ZNF512Q96ME7 567 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 C10orf88Q9H8K7 445 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 KCNK13Q9HB14 408 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 DONSONQ9NYP3 566 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 HEY2Q9UBP5 337 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TTLL3Q9Y4R7 772 aa15.31■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CEP290O15078 2479 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 RPSAP08865 295 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TPBGLP0DKB5 382 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PYGBP11216 843 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MLNP12872 115 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GOT1P17174 413 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SCAPQ12770 1279 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PLD1Q13393 1074 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CAMK1Q14012 370 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 C10orf120Q5SQS8 335 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TIFABQ6ZNK6 161 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 DNAJB7Q7Z6W7 309 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CCNJLQ8IV13 435 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TNS4Q8IZW8 715 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PQLC3Q8N755 202 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PDZD8Q8NEN9 1154 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PCDH19Q8TAB3 1148 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 THOC1Q96FV9 657 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MYRFLQ96LU7 910 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SERPINB11Q96P15 392 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NUDCD1Q96RS6 583 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GDF15Q99988 308 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CCSER2Q9H7U1 834 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 OLA1Q9NTK5 396 aaKnown RBP15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SORCS3Q9UPU3 1222 aa15.3■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CREB3O43889 395 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TLR5O60602 858 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NEFHP12036 1026 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ARL4AP40617 200 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ERVK-21P61565 698 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ZNF449Q6P9G9 518 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CAND1Q86VP6 1230 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 APLFQ8IW19 511 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 KREMEN2Q8NCW0 462 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GSDMBQ8TAX9 411 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 OVCA2Q8WZ82 227 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SAMD11Q96NU1 681 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CSPG4P5Q96PW8 444 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FAM111AQ96PZ2 611 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SRPK1Q96SB4 655 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MYO7AQ13402 2215 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 WDR91A4D1P6 747 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ZNF840PA6NDX5 716 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 HACD1B0YJ81 288 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TRIM49D1C9J1S8 452 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FAM72CH0Y354 149 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GOLGA8RI6L899 631 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 HGSO14964 777 aaPredicted RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CBX6O95503 412 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GLUD1P00367 558 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 EPHB2P29323 1055 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CCR1P32246 355 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CRHR1P34998 444 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ZBTB16Q05516 673 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 GPM6BQ13491 265 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NAB1Q13506 487 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 BRMS1LQ5PSV4 323 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FAM72AQ5TYM5 149 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FAM72DQ6L9T8 149 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NPNTQ6UXI9 565 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 CCDC149Q6ZUS6 474 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 FAM72BQ86X60 149 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MIB1Q86YT6 1006 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PLCD3Q8N3E9 789 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 RFWD2Q8NHY2 731 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 ACMSDQ8TDX5 336 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PTPRN2Q92932 1015 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PSMG2Q969U7 264 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TRMT2BQ96GJ1 504 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 NAF1Q96HR8 494 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 EBNA1BP2Q99848 306 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TMEM120AQ9BXJ8 343 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 PBX4Q9BYU1 374 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 TRPM5Q9NZQ8 1165 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 MARCH2Q9P0N8 246 aa15.29■□□□□ 0.04
CDK5RAP3-236ENST00000584991 SIRPGQ9P1W8 387 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms