RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	PPP2CA	P67775	309 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	IL9R	Q01113	521 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GNA12	Q03113	381 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CACNA1E	Q15878	2313 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ST3GAL2	Q16842	350 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FILIP1L	Q4L180	1135 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PRAMEF14	Q5SWL7	426 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RETSAT	Q6NUM9	610 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF783	Q6ZMS7	281 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	STRADA	Q7RTN6	431 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCDC185	Q8N715	623 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	C3orf20	Q8ND61	904 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	OR2A12	Q8NGT7	310 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GRIN3A	Q8TCU5	1115 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SKA1	Q96BD8	255 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	BPIFA3	Q9BQP9	254 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MAGEB5	Q9BZ81	275 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RTN4	Q9NQC3	1192 aa	Known RBP	13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DNAI1	Q9UI46	699 aa		13.94	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TPR	P12270	2363 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CEP295	Q9C0D2	2601 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SIGLEC16	A6NMB1	481 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TMCO5B	A8MYB1	307 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FAM72C	H0Y354	149 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186		H0Y8X5	98 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	WNT9A	O14904	365 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	VILL	O15195	856 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PLRG1	O43660	514 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CTSL	P07711	333 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PLEK	P08567	350 aa	Predicted RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF883	P0CG24	379 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TNFAIP3	P21580	790 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CTSK	P43235	329 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF165	P49910	485 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CLCN6	P51797	869 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	HDAC4	P56524	1084 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	C1QBP	Q07021	282 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SUZ12	Q15022	739 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ARTN	Q5T4W7	220 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FAM72A	Q5TYM5	149 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	AGBL4	Q5VU57	503 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FAM72D	Q6L9T8	149 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SCYL2	Q6P3W7	929 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	C22orf39	Q6P5X5	142 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	WDR59	Q6PJI9	974 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MON1B	Q7L1V2	547 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PRPF39	Q86UA1	669 aa	Known RBP	13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FAM72B	Q86X60	149 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PNPLA1	Q8N8W4	532 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CHST14	Q8NCH0	376 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RHBDD1	Q8TEB9	315 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	MCEE	Q96PE7	176 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	OSBPL2	Q9H1P3	480 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DYRK4	Q9NR20	520 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF212	Q9UDV6	495 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PCOLCE2	Q9UKZ9	415 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	WASF3	Q9UPY6	502 aa		13.93	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GOLGA8CP	A6NN73	597 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	C1QTNF9B	B2RNN3	333 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FLRT2	O43155	660 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SLC7A4	O43246	635 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCP110	O43303	1012 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	LRIG2	O94898	1065 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	WNT1	P04628	370 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FTH1P19	P0C7X4	201 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	C1QTNF9	P0C862	333 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CD38	P28907	300 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ACVRL1	P37023	503 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SERPINH1	P50454	418 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CCT8	P50990	548 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	GSC	P56915	257 aa	Predicted RBP	13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RPL7A	P62424	266 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ASIC2	Q16515	512 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ZNF423	Q2M1K9	1284 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SLC45A4	Q5BKX6	768 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ARSI	Q5FYB1	569 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ACAD10	Q6JQN1	1059 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	DCUN1D2	Q6PH85	259 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	IRF2BP2	Q7Z5L9	587 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	SLFN11	Q7Z7L1	901 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RYBP	Q8N488	228 aa	Predicted RBP	13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CHCHD4	Q8N4Q1	142 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CENPI	Q92674	756 aa	Predicted RBP	13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	TBC1D31	Q96DN5	1066 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	KDM4C	Q9H3R0	1056 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	NDFIP2	Q9NV92	336 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	IL36A	Q9UHA7	158 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	KLK13	Q9UKR3	277 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	FCF1	Q9Y324	198 aa	Known RBP	13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PCDHGB2	Q9Y5G2	931 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ACTL7A	Q9Y615	435 aa		13.92	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	AKAP13	Q12802	2813 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	ASPM	Q8IZT6	3477 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	PLXNA2	O75051	1894 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	LRRC53	A6NM62	1247 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	RNF103	O00237	685 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	LAT	O43561	262 aa		13.91	□□□□□ -0.18
CDK5RAP3-233	ENST00000584186	CBFA2T3	O75081	653 aa		13.91	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms