RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 TSPYL2Q9H2G4 693 aaPredicted RBP8.69□□□□□ -1.02
RPAIN-215ENST00000575112 XPNPEP3Q9NQH7 507 aa8.69□□□□□ -1.02
RPAIN-215ENST00000575112 UTP6Q9NYH9 597 aaKnown RBP8.69□□□□□ -1.02
RPAIN-215ENST00000575112 VANGL2Q9ULK5 521 aa8.69□□□□□ -1.02
RPAIN-215ENST00000575112 RUVBL2Q9Y230 463 aaKnown RBP8.69□□□□□ -1.02
RPAIN-215ENST00000575112 CRYL1Q9Y2S2 319 aa8.69□□□□□ -1.02
RPAIN-215ENST00000575112 IPPQ9Y573 584 aa8.69□□□□□ -1.02
RPAIN-215ENST00000575112 PTPRFP10586 1907 aa8.69□□□□□ -1.02
RPAIN-215ENST00000575112 C17orf102A2RUQ5 167 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SOCS7O14512 581 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ZSCAN9O15535 394 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 HNRNPCL1O60812 293 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ATG7O95352 703 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SNAI1O95863 264 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 TBX18O95935 607 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 JUNP05412 331 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 POLBP06746 335 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 MMP3P08254 477 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ELNP15502 786 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 GARSP41250 739 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 DPP6P42658 865 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 IRF9Q00978 393 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 EFEMP1Q12805 493 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 LCLAT1Q6UWP7 414 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF534Q76KX8 674 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 METTL23Q86XA0 190 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PLD6Q8N2A8 252 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 EFHBQ8N7U6 833 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 DCBLD1Q8N8Z6 715 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ACVR1CQ8NER5 493 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 C12orf42Q96LP6 360 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF560Q96MR9 790 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CATSPER2Q96P56 530 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 FICDQ9BVA6 458 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 FOXP3Q9BZS1 431 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 WWP1Q9H0M0 922 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 OR12D3Q9UGF7 316 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ST3GAL5Q9UNP4 418 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 A0A0G2JLL6 359 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SERPINA6P08185 405 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 HNRNPLP14866 589 aaKnown RBP eCLIP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CHN2P52757 468 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 DYNC1I2Q13409 638 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 HNRNPDQ14103 355 aaKnown RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CSHL1Q14406 222 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SNX17Q15036 470 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CYTH1Q15438 398 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PPP1R2P3Q6NXS1 205 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PRRT2Q7Z6L0 340 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 OSTM1Q86WC4 334 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ABI1Q8IZP0 508 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 GSDMBQ8TAX9 411 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 BLOC1S5Q8TDH9 187 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 DCUN1D1Q96GG9 259 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 C7orf26Q96N11 449 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SENP6Q9GZR1 1112 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ABHD16BQ9H3Z7 469 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CYP3A43Q9HB55 503 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 TMEM216Q9P0N5 145 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PPME1Q9Y570 386 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 STYXL1Q9Y6J8 313 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 A0A096LPK6 155 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 NEMP2A6NFY4 417 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CNMDO75829 334 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 THP07101 528 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 RALBP11234 206 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CPB1P15086 417 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 XRCC1P18887 633 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SLC1A6P48664 564 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CDH15P55291 814 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 LILRA4P59901 499 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PLOD1Q02809 727 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 RPS6KA2Q15349 733 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 LRRC38Q5VT99 294 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 MBLAC2Q68D91 279 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SCIMPQ6UWF3 145 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PDZD4Q76G19 769 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 ARRDC4Q8NCT1 418 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CMASQ8NFW8 434 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SKA2Q8WVK7 121 aaPredicted RBP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 NT5MQ9NPB1 228 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 PIGVQ9NUD9 493 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 CDY2AQ9Y6F7 541 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 COMMD3-BMI1R4GMX3 469 aa8.68□□□□□ -1.02
RPAIN-215ENST00000575112 SF3B1O75533 1304 aaKnown RBP eCLIP8.68□□□□□ -1.02
RPAIN-215ENST00000575112 RGPD3A6NKT7 1758 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 RGPD4Q7Z3J3 1758 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 CRTAMO95727 393 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 IL4RP24394 825 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ALDH1A3P47895 512 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 PSEN2P49810 448 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 NUDT2P50583 147 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ZNF132P52740 706 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 COPAP53621 1224 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ATN1P54259 1190 aaPredicted RBP8.67□□□□□ -1.02
RPAIN-215ENST00000575112 EMP3P54852 163 aa8.67□□□□□ -1.02
RPAIN-215ENST00000575112 ART3Q13508 389 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms