RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 IL1RAPL1Q9NZN1 696 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 KLHL13Q9P2N7 655 aa5.05□□□□□ -1.6
LINC00560-201ENST00000564593 A0A087X0M5 115 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 A0A1B0GX30 115 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 TARSL2A2RTX5 802 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CEP104O60308 925 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 UGDHO60701 494 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 TUBB4AP04350 444 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CIITAP33076 1130 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 EIF5P55010 431 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 UFM1P61960 85 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 PTP4A2Q12974 167 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 SLC9C1Q4G0N8 1177 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CEP78Q5JTW2 689 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 TTLL5Q6EMB2 1281 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CLEC4GQ6UXB4 293 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF66Q6ZN08 573 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ADGRG3Q86Y34 549 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CPXM2Q8N436 756 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 FAM118BQ9BPY3 351 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 LBHD1Q9BQE6 289 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 HIPK3Q9H422 1215 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF304Q9HCX3 659 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ZDHHC7Q9NXF8 308 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 KCND2Q9NZV8 630 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 PEMTQ9UBM1 199 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ICKQ9UPZ9 632 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 C17orf113A0A1B0GUU1 675 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 F5H0A9 414 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 DDX58O95786 925 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 LATS1O95835 1130 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 DDAH2O95865 285 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 IL1AP01583 271 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 UBL4AP11441 157 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 COX7A2P14406 83 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 EPHA8P29322 1005 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 MPGP29372 298 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CPA2P48052 419 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 HARS2P49590 506 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 EFNB1P98172 346 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 NHLH1Q02575 133 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 GHRHRQ02643 423 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 FOXF2Q12947 444 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 GPATCH4Q5T3I0 446 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 INO80CQ6PI98 192 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 FAM57BQ71RH2 274 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 PCGF5Q86SE9 256 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CCDC25Q86WR0 208 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 DIS3L2Q8IYB7 885 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 GALNT16Q8N428 558 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 PLD5Q8N7P1 536 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 KCNG4Q8TDN1 519 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ADAMTS15Q8TE58 950 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 CENPIQ92674 756 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 DPF1Q92782 380 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 TEFMQ96QE5 360 aaKnown RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 FRG2BQ96QU4 278 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 PIMREGQ9BSJ6 248 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 ENTPD7Q9NQZ7 604 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 BLOC1S4Q9NUP1 217 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 TAS2R10Q9NYW0 307 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 NLKQ9UBE8 527 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 FBXO9Q9UK97 447 aaPredicted RBP5.04□□□□□ -1.6
LINC00560-201ENST00000564593 UTS2RQ9UKP6 389 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 SARDHQ9UL12 918 aa5.04□□□□□ -1.6
LINC00560-201ENST00000564593 RHODO00212 210 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 PPP6CO00743 305 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 NEURL1O76050 574 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 ADAP00813 363 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 SERPINC1P01008 464 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 WNT1P04628 370 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 CERS1P27544 350 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 CFHR1Q03591 330 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 PMPCAQ10713 525 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 ZNF667Q5HYK9 610 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 C17orf99Q6UX52 265 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 IL20RBQ6UXL0 311 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 RRM2BQ7LG56 351 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 UBE2Q1Q7Z7E8 422 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 CPLX4Q7Z7G2 160 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 IGFN1Q86VF2 1251 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 FAR1Q8WVX9 515 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 SH2D3AQ9BRG2 576 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 GRHL1Q9NZI5 618 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 LAMP3Q9UQV4 416 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 COX11Q9Y6N1 276 aa5.03□□□□□ -1.6
LINC00560-201ENST00000564593 TEX13CA0A0J9YWL9 993 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 PGPEP1LA6NFU8 196 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 USO1O60763 962 aaKnown RBP5.02□□□□□ -1.61
LINC00560-201ENST00000564593 LCKP06239 509 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 HSPA1AP0DMV8 641 aaKnown RBP5.02□□□□□ -1.61
LINC00560-201ENST00000564593 HSPA1BP0DMV9 641 aaKnown RBP5.02□□□□□ -1.61
LINC00560-201ENST00000564593 CHMP24386 653 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 DCAF7P61962 342 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 RPE65Q16518 533 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 EDRF1Q3B7T1 1238 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 MZT2BQ6NZ67 158 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 TMEM81Q6P7N7 255 aa5.02□□□□□ -1.61
LINC00560-201ENST00000564593 TMTC3Q6ZXV5 915 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms