RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 YBEYP58557 167 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 SERINC3Q13530 473 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 MESDQ14696 234 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 POLD3Q15054 466 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 PPP6R3Q5H9R7 873 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 IL31Q6EBC2 164 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 LEKR1Q6ZMV7 388 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 Q6ZVU0 165 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 CACUL1Q86Y37 369 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 TP53INP2Q8IXH6 220 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 ATP11CQ8NB49 1132 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 OR2A12Q8NGT7 310 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 RFFLQ8WZ73 363 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 HSPH1Q92598 858 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 PRCCQ92733 491 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 LOXL4Q96JB6 756 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 CSPG4P5Q96PW8 444 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 SLC39A8Q9C0K1 460 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 CATSPERBQ9H7T0 1116 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 FBRSQ9HAH7 460 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 PARD6AQ9NPB6 346 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBR1-204ENST00000563239 WSB2Q9NYS7 404 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 SERGEFQ9UGK8 458 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 SLC25A13Q9UJS0 675 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 SARDHQ9UL12 918 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 EPG5Q9HCE0 2579 aa8.73□□□□□ -1.01
UBR1-204ENST00000563239 KMT2BQ9UMN6 2715 aaPredicted RBP8.73□□□□□ -1.01
UBR1-204ENST00000563239 ABCA7Q8IZY2 2146 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 A0A0U1RQJ8 604 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 CXorf51AA0A1B0GTR3 108 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 TMEM110-MUSTN1A8MSY1 372 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 J3KR12 359 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 MCF2LO15068 1137 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ZBTB24O43167 697 aaPredicted RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 EPN2O95208 641 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 CTSLP07711 333 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 RETP07949 1114 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 CD6P30203 668 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 CYLC1P35663 651 aaPredicted RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 NNMTP40261 264 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ARHGAP25P42331 645 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 CLCN6P51797 869 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ZNF135P52742 658 aaPredicted RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 NDST2P52849 883 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ZBTB16Q05516 673 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 SLC20A2Q08357 652 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 BYSLQ13895 437 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 DPYSL3Q14195 570 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ELAVL3Q14576 367 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 CST6Q15828 149 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ACCSLQ4AC99 568 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ZNF776Q68DI1 518 aaPredicted RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 RETSATQ6NUM9 610 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 C22orf39Q6P5X5 142 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ARHGAP36Q6ZRI8 547 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 MMAAQ8IVH4 418 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 SLC41A1Q8IVJ1 513 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 RHOT2Q8IXI1 618 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 TMEFF1Q8IYR6 380 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 AADATQ8N5Z0 425 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 DEFB119Q8N690 84 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 CHST14Q8NCH0 376 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 ACRBPQ8NEB7 543 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 RUBCNQ92622 972 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 FAM131CQ96AQ9 280 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 FAF2Q96CS3 445 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 TOE1Q96GM8 510 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 CELF6Q96J87 481 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 BAG1Q99933 345 aaPredicted RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 CEP44Q9C0F1 390 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 LACRTQ9GZZ8 138 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 TNKS2Q9H2K2 1166 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 PABPC3Q9H361 631 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 PDFQ9HBH1 243 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 KLHL11Q9NVR0 708 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 LCMT1Q9UIC8 334 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 PPM1HQ9ULR3 514 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 FCF1Q9Y324 198 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 HYOU1Q9Y4L1 999 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 DUSP10Q9Y6W6 482 aa8.72□□□□□ -1.01
UBR1-204ENST00000563239 NYNRINQ9P2P1 1898 aaKnown RBP8.72□□□□□ -1.01
UBR1-204ENST00000563239 TNRC6BQ9UPQ9 1833 aaKnown RBP8.71□□□□□ -1.01
UBR1-204ENST00000563239 A0A0A6YYK5 440 aaPredicted RBP8.71□□□□□ -1.02
UBR1-204ENST00000563239 BCLAF3A2AJT9 711 aaKnown RBP8.71□□□□□ -1.02
UBR1-204ENST00000563239 C3orf70A6NLC5 250 aaPredicted RBP8.71□□□□□ -1.02
UBR1-204ENST00000563239 H3BRJ5 948 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 ALOX15BO15296 676 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 MID1O15344 667 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 PJA2O43164 708 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 BUB1BO60566 1050 aaPredicted RBP8.71□□□□□ -1.02
UBR1-204ENST00000563239 RHOBTB1O94844 696 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 PEX11BO96011 259 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 SLC8A1P32418 973 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 ACSL1P33121 698 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 DRD3P35462 400 aa8.71□□□□□ -1.02
UBR1-204ENST00000563239 ETFBP38117 255 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms