RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 CD19P15391 556 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 GRIA2P42262 883 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 PRCPP42785 496 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 INCA1Q0VD86 236 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 BECN1Q14457 450 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 GOLGA7BQ2TAP0 167 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 UAP1L1Q3KQV9 507 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 HSF5Q4G112 596 aaPredicted RBP7.69□□□□□ -1.18
SPG11-213ENST00000558988 EOGTQ5NDL2 527 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 KRT39Q6A163 491 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 GRAMD4Q6IC98 578 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 KLHL10Q6JEL2 608 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 CRYBG2Q8N1P7 616 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 FRMD1Q8N878 549 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 IL17RCQ8NAC3 791 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 PIGKQ92643 395 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 HNRNPABQ99729 332 aaKnown RBP7.69□□□□□ -1.18
SPG11-213ENST00000558988 EDEM2Q9BV94 578 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 DNAI2Q9GZS0 605 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 CYP3A43Q9HB55 503 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 NMUR1Q9HB89 426 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 TNFRSF12AQ9NP84 129 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 RMND1Q9NWS8 449 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 OSER1Q9NX31 292 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 C11orf21Q9P2W6 132 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 DEC1Q9P2X7 70 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 LSM7Q9UK45 103 aaKnown RBP7.69□□□□□ -1.18
SPG11-213ENST00000558988 SCML2Q9UQR0 700 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 TSC22D4Q9Y3Q8 395 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 THADAQ6YHU6 1953 aa7.69□□□□□ -1.18
SPG11-213ENST00000558988 UPK3BL1B0FP48 263 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 PATE3B3GLJ2 98 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 HHLA1C9JL84 531 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 UPK3BL2E5RIL1 263 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 MAPK13O15264 365 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 STX10O60499 249 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 SMC2O95347 1197 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CAVIN2O95810 425 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 ZDHHC11BP0C7U3 371 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 ZNF806P0C7X5 589 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 RALAP11233 206 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 HOXB2P14652 356 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 TYRP14679 529 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 PRKCAP17252 672 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 MAPK8P45983 427 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 TUBP50607 506 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 MRPS21P82921 87 aaKnown RBP7.68□□□□□ -1.18
SPG11-213ENST00000558988 EDRF1Q3B7T1 1238 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CCDC40Q4G0X9 1142 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CBWD6Q4V339 395 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CBWD3Q5JTY5 395 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CBWD5Q5RIA9 395 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 STPG1Q5TH74 334 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 EGFLAMQ63HQ2 1017 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 ANKRD40Q6AI12 368 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 TOGARAM2Q6ZUX3 1019 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 ZNF575Q86XF7 245 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CACUL1Q86Y37 369 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CHPFQ8IZ52 775 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 FBXL13Q8NEE6 735 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 NDRG1Q92597 394 aaKnown RBP7.68□□□□□ -1.18
SPG11-213ENST00000558988 SMARCE1Q969G3 411 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 OTUB2Q96DC9 234 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 TMEM176AQ96HP8 235 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CNOT6LQ96LI5 555 aaKnown RBP7.68□□□□□ -1.18
SPG11-213ENST00000558988 ACOX2Q99424 681 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CSNK1G1Q9HCP0 422 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 VPS45Q9NRW7 570 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 CISHQ9NSE2 258 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 RAB20Q9NX57 234 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 RAD54BQ9Y620 910 aa7.68□□□□□ -1.18
SPG11-213ENST00000558988 MYO18AQ92614 2054 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 FAM237AA0A1B0GTK4 181 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 SLC12A8A0AV02 714 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 BCLAF3A2AJT9 711 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 C4orf47A7E2U8 309 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 HOXC11O43248 304 aaPredicted RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 CALCAP01258 141 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 CFIP05156 583 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 CORO1AP31146 461 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 EIF2DP41214 584 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 KIF11P52732 1056 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 PMS1P54277 932 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 RAD23BP54727 409 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 SLC8A3P57103 927 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 STIM1Q13586 685 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 NFIL3Q16649 462 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 ZCWPW2Q504Y3 356 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 ZNF658Q5TYW1 1059 aaPredicted RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 PMS2CLQ68D20 193 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 SDE2Q6IQ49 451 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 KIAA1324Q6UXG2 1013 aaKnown RBP7.67□□□□□ -1.18
SPG11-213ENST00000558988 LPCAT2Q7L5N7 544 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 SCD5Q86SK9 330 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 PIGZQ86VD9 579 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 RASSF3Q86WH2 238 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 CREBRFQ8IUR6 639 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 TERB1Q8NA31 727 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 SLC4A11Q8NBS3 891 aa7.67□□□□□ -1.18
SPG11-213ENST00000558988 KISS1RQ969F8 398 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms