RNA–Protein interactions for RNA: ENST00000556825.5

SHMT2-226, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 2,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-226ENST00000556825 IFNA16P05015 189 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 GNAO1P09471 354 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 OR52Z1P0C646 297 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 CYP2D6P10635 497 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SPNP16150 400 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 TRIM23P36406 574 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 HSD17B2P37059 387 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 DDOSTP39656 456 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 MAGEA11P43364 429 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 ALDH7A1P49419 539 aaKnown RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SERPINH1P50454 418 aaKnown RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 TNK2Q07912 1038 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 GRB10Q13322 594 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 AQP6Q13520 282 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SLC12A1Q13621 1099 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 PON2Q15165 354 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 PAGE2BQ5JRK9 111 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 PDPK2PQ6A1A2 396 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 GATAD2AQ86YP4 633 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 MFSD2AQ8NA29 543 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 BPIFB6Q8NFQ5 453 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 OR6Q1Q8NGQ2 317 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 BTN2A3PQ96KV6 586 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 RIPOR3Q96MK2 946 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 CDRT15Q96T59 188 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 APOL6Q9BWW8 343 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 GPR88Q9GZN0 384 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 C20orf27Q9GZN8 174 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 TMEM216Q9P0N5 145 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 FNIP2Q9P278 1114 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 EIF3KQ9UBQ5 218 aaKnown RBP14.03□□□□□ -0.16
SHMT2-226ENST00000556825 SNX7Q9UNH6 387 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 ZNF175Q9Y473 711 aa14.03□□□□□ -0.16
SHMT2-226ENST00000556825 CROCCQ5TZA2 2017 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 ZNF804BA4D1E1 1349 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 H0Y858 1186 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 UPK1BO75841 260 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 FTLP02792 175 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-226ENST00000556825 PDGFAP04085 211 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 MBL2P11226 248 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-226ENST00000556825 SHMT1P34896 483 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 HLCSP50747 726 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 ARHGDIAP52565 204 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 FOXO4P98177 505 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 ENPEPQ07075 957 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 BFSP1Q12934 665 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 CIAPIN1Q6FI81 312 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 LDHAL6AQ6ZMR3 332 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 ZBTB49Q6ZSB9 765 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 CPNE8Q86YQ8 564 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 EID3Q8N140 333 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 CPA6Q8N4T0 437 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 POC5Q8NA72 575 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 SHCBP1Q8NEM2 672 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 LRTOMTQ8WZ04 291 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 MAGED4Q96JG8 741 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 VCPIP1Q96JH7 1222 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 NTN4Q9HB63 628 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.16
SHMT2-226ENST00000556825 BMP2KQ9NSY1 1161 aaPredicted RBP14.02□□□□□ -0.16
SHMT2-226ENST00000556825 DNAJC28Q9NX36 388 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 EMC3Q9P0I2 261 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 ENOPH1Q9UHY7 261 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 ACAD8Q9UKU7 415 aa14.02□□□□□ -0.16
SHMT2-226ENST00000556825 COL22A1Q8NFW1 1626 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-226ENST00000556825 CLUHO75153 1309 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 PDZK1P1A8MUH7 402 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 PDHXO00330 501 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 COPEO14579 308 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 ADAM11O75078 769 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 KRT37O76014 449 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 ME2P23368 584 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 UQCRC1P31930 480 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 CDH5P33151 784 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-226ENST00000556825 CYP2C18P33260 490 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 QARSP47897 775 aaKnown RBP14.02□□□□□ -0.17
SHMT2-226ENST00000556825 RUNX1T1Q06455 604 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 FAM26FQ5R3K3 315 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 RNASEH2BQ5TBB1 312 aaKnown RBP14.02□□□□□ -0.17
SHMT2-226ENST00000556825 PPP4R3CPQ6ZMV5 832 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 SNAPC3Q92966 411 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 RPRD1AQ96P16 312 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-226ENST00000556825 SPOCK3Q9BQ16 436 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 SENP7Q9BQF6 1050 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 TEX13BQ9BXU2 312 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 ADAMTS10Q9H324 1103 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 KCTD10Q9H3F6 313 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 FAM105AQ9NUU6 356 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 SMOXQ9NWM0 555 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 DTLQ9NZJ0 730 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 GCNT4Q9P109 453 aa14.02□□□□□ -0.17
SHMT2-226ENST00000556825 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 GTPBP10A4D1E9 387 aaKnown RBP14.01□□□□□ -0.17
SHMT2-226ENST00000556825 LRRC72A6NJI9 287 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 LINC01387J3KSC0 135 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 ACOT8O14734 319 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 RIMBP2O15034 1052 aa14.01□□□□□ -0.17
SHMT2-226ENST00000556825 UGT2B11O75310 529 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms