RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SLC25A18Q9H1K4 315 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 EBF3Q9H4W6 596 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 TTC12Q9H892 705 aaPredicted RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 TBC1D22BQ9NU19 505 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 ARL15Q9NXU5 204 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 MAFFQ9ULX9 164 aa5.81□□□□□ -1.48
VRK1-205ENST00000555402 LAS1LQ9Y4W2 734 aaKnown RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 FNDC1Q4ZHG4 1894 aaPredicted RBP5.81□□□□□ -1.48
VRK1-205ENST00000555402 FAM90A7PA6NKC0 464 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 FAM90A22PA8MWA6 464 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 FAM90A12PA8MX19 464 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 FAM90A23PA8MXZ1 464 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 POC1B-GALNT4F8VUJ3 575 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 RNASEH2AO75792 299 aaKnown RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 F9P00740 461 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 ADPRHP54922 357 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 NAP1L1P55209 391 aaKnown RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 DCAF7P61962 342 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 CERKLQ49MI3 558 aaPredicted RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 ARL13AQ5H913 290 aaPredicted RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 SLC30A9Q6PML9 568 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 H1FNTQ75WM6 255 aaPredicted RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 CPLX4Q7Z7G2 160 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 GALNT7Q86SF2 657 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 UEVLDQ8IX04 471 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 ANKRD52Q8NB46 1076 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 C2CD4CQ8TF44 421 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 CNOT9Q92600 299 aaKnown RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 ATP2A3Q93084 1043 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 REPS1Q96D71 796 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 ELP4Q96EB1 424 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 CHCHD6Q9BRQ6 235 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 SLC22A11Q9NSA0 550 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 BEX4Q9NWD9 120 aaPredicted RBP5.8□□□□□ -1.48
VRK1-205ENST00000555402 WWOXQ9NZC7 414 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 NAALADL1Q9UQQ1 740 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 PKP3Q9Y446 797 aa5.8□□□□□ -1.48
VRK1-205ENST00000555402 PGPEP1LA6NFU8 196 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 TMEM232C9JQI7 657 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 MCIDASD6RGH6 385 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 F5H0A9 414 aaPredicted RBP5.79□□□□□ -1.48
VRK1-205ENST00000555402 STRNO43815 780 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 HBP1O60381 514 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 ZBED4O75132 1171 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 TMEM63AO94886 807 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 CHMP24386 653 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 POLD2P49005 469 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 PLCD1P51178 756 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 IL13RA2Q14627 380 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 RABEP1Q15276 862 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 SLC45A4Q5BKX6 768 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 PRAMEF17Q5VTA0 474 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 CFAP161Q6P656 301 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 RHPN2Q8IUC4 686 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 DIS3L2Q8IYB7 885 aaKnown RBP5.79□□□□□ -1.48
VRK1-205ENST00000555402 NFKBIDQ8NI38 313 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 KCNG4Q8TDN1 519 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.79□□□□□ -1.48
VRK1-205ENST00000555402 PRSS22Q9GZN4 317 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 EPHX3Q9H6B9 360 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 PPP1R14DQ9NXH3 145 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 TAS2R10Q9NYW0 307 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 OSGIN2Q9Y236 505 aa5.79□□□□□ -1.48
VRK1-205ENST00000555402 SPATA31A5Q5VU36 1347 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 EMSYQ7Z589 1322 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 SPATA31A7Q8IWB4 1347 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 ANKRD18BA2A2Z9 1011 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 KCNU1A8MYU2 1149 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 PER2O15055 1255 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 USO1O60763 962 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 HSPA1AP0DMV8 641 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 HSPA1BP0DMV9 641 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 AKR1A1P14550 325 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 TACR3P29371 465 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 IDUAP35475 653 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 HARS2P49590 506 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 MTA1Q13330 715 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 ZNF766Q5HY98 468 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 UBAP2Q5T6F2 1119 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 PXDC1Q5TGL8 231 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 MDGA2Q7Z553 956 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 MON1AQ86VX9 555 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 RFX6Q8HWS3 928 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 PNLDC1Q8NA58 520 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 FAM110DQ8TAY7 271 aaPredicted RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 PIGKQ92643 395 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 CUL5Q93034 780 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 TIGD1Q96MW7 591 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 ZNF347Q96SE7 839 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 CADM1Q9BY67 442 aaKnown RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 HCN3Q9P1Z3 774 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 SLC25A10Q9UBX3 287 aaPredicted RBP5.78□□□□□ -1.48
VRK1-205ENST00000555402 FBXO4Q9UKT5 387 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 SLC8A2Q9UPR5 921 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 DHDHQ9UQ10 334 aa5.78□□□□□ -1.48
VRK1-205ENST00000555402 GOLGA6L10A0A0M3HER8 536 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 FSD2A1L4K1 749 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 GAGE10A6NGK3 116 aa5.77□□□□□ -1.49
VRK1-205ENST00000555402 MYMKA6NI61 221 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms