RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CRISPLD1Q9H336 500 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 KCND2Q9NZV8 630 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ARHGEF40Q8TER5 1519 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 KANSL1LA0AUZ9 987 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RGS10O43665 173 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 GJA1P17302 382 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 UGT1A5P35504 534 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 LHX1P48742 406 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SEC13P55735 322 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 LRRC6Q86X45 466 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 C5orf34Q96MH7 638 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 QRFPRQ96P65 431 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NMRAL1Q9HBL8 299 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 GPRC5CQ9NQ84 441 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FKBP14Q9NWM8 211 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MGAT4AQ9UM21 535 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ATP5BP06576 529 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CXorf57Q6NSI4 855 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MPZL3Q6UWV2 235 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RASAL3Q86YV0 1011 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 DNAJB3Q8WWF6 145 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SGCDQ92629 289 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TRIM9Q9C026 710 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MROH8Q9H579 483 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ASAH2Q9NR71 780 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 OPTCQ9UBM4 332 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TPRKBQ9Y3C4 175 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RWDD3Q9Y3V2 267 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 OGTO15294 1046 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ALAS2P22557 587 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FASP25445 335 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PSMD8P48556 350 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 GDI2P50395 445 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CDC42P60953 191 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 LSM3P62310 102 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RBM23Q86U06 439 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FAM126BQ8IXS8 530 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ATP8B4Q8TF62 1192 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ABHD5Q8WTS1 349 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NKD1Q969G9 470 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TEKT5Q96M29 485 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FBXO44Q9H4M3 255 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RRAGCQ9HB90 399 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 DDX43Q9NXZ2 648 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 DMGDHQ9UI17 866 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 H3BNH8 94 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 HTR1BP28222 390 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 VBP1P61758 197 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 POU5F2Q8N7G0 328 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MAGEC3Q8TD91 643 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PIH1D2Q8WWB5 315 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 RXFP2Q8WXD0 754 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 HGH1Q9BTY7 390 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 KLQ9UEF7 1012 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PNMA8CA0A1B0GUJ8 204 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 QSOX1O00391 747 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 BPNT1O95861 308 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ALDH2P05091 517 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 LRPAP1P30533 357 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SOX10P56693 466 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 MPP3Q13368 585 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TFDP3Q5H9I0 405 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 EPHA10Q5JZY3 1008 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CHST4Q8NCG5 386 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CASKIN2Q8WXE0 1202 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 GSDMCQ9BYG8 508 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 DEFB129Q9H1M3 183 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 IFT46Q9NQC8 304 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TRMT13Q9NUP7 481 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SETD4Q9NVD3 440 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NCKIPSDQ9NZQ3 722 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 GGA2Q9UJY4 613 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 PSME2Q9UL46 239 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 DNMT1P26358 1616 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ZBTB14O43829 449 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 NQO1P15559 274 aaKnown RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SLC7A2P52569 658 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ACAP1Q15027 740 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 QPRTQ15274 297 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FAM91A1Q658Y4 838 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SATL1Q86VE3 508 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 CLVS1Q8IUQ0 354 aaPredicted RBP6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF276Q8N554 614 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 METTL6Q8TCB7 284 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 HAVCR1Q96D42 359 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TMEM121Q9BTD3 319 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 SNTG2Q9NY99 539 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 VPS4AQ9UN37 437 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 TFR2Q9UP52 801 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ANKRD6Q9Y2G4 727 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF780BQ9Y6R6 833 aa6.97□□□□□ -1.29
SYNE2-216ENST00000555002 FAM58BPP0C7Q3 252 aa6.96□□□□□ -1.29
SYNE2-216ENST00000555002 DBTP11182 482 aaKnown RBP6.96□□□□□ -1.29
SYNE2-216ENST00000555002 ZNF7P17097 686 aaPredicted RBP6.96□□□□□ -1.29
SYNE2-216ENST00000555002 FMR1NBQ8N0W7 255 aaPredicted RBP6.96□□□□□ -1.29
SYNE2-216ENST00000555002 ALLCQ8N6M5 410 aa6.96□□□□□ -1.29
SYNE2-216ENST00000555002 TBC1D16Q8TBP0 767 aa6.96□□□□□ -1.29
SYNE2-216ENST00000555002 ELMO3Q96BJ8 720 aa6.96□□□□□ -1.29
SYNE2-216ENST00000555002 TAAR1Q96RJ0 339 aa6.96□□□□□ -1.29
SYNE2-216ENST00000555002 FAM192AQ9GZU8 254 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms