RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 MYCBPAPQ8TBZ2 947 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 POF1BQ8WVV4 589 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ASB15Q8WXK1 588 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ARNTL2Q8WYA1 636 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 PPP2R3CQ969Q6 453 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 MRPL38Q96DV4 380 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 TMEM176AQ96HP8 235 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 FUBP3Q96I24 572 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CEP295NLQ96MC4 621 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 PKMYT1Q99640 499 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 TCF25Q9BQ70 676 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 RTP3Q9BQQ7 232 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 GPR88Q9GZN0 384 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ZCWPW1Q9H0M4 648 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ALG13Q9NP73 1137 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ENTPD7Q9NQZ7 604 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 DDX43Q9NXZ2 648 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 AIPL1Q9NZN9 384 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 CHD7Q9P2D1 2997 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 DPP7Q9UHL4 492 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 MTUS1Q9ULD2 1270 aa6.06□□□□□ -1.44
SCAF11-213ENST00000550629 BZW2Q9Y6E2 419 aaKnown RBP6.06□□□□□ -1.44
SCAF11-213ENST00000550629 ATP8B3O60423 1300 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 KIAA1671Q9BY89 1806 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 AKR1B15C9JRZ8 316 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 MED7O43513 233 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 NCK2O43639 380 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ABLIM3O94929 683 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CXCL14O95715 111 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 LSM8O95777 96 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CNPP09543 421 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 VDRP11473 427 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 KRT5P13647 590 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 DNAJB1P25685 340 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 LMO2P25791 158 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CASP14P31944 242 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 IGFALSP35858 605 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 PRKCIP41743 596 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 MAGEA11P43364 429 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 MECP2P51608 486 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 GSDMDP57764 484 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CDK17Q00537 523 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 IRF9Q00978 393 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CAMK1Q14012 370 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 USP10Q14694 798 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CNGA2Q16280 664 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ARHGAP44Q17R89 818 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CFAP221Q4G0U5 840 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 SFMBT2Q5VUG0 894 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ARHGAP17Q68EM7 881 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ZCCHC8Q6NZY4 707 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 FAM171BQ6P995 826 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 GJB7Q6PEY0 223 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 TMEM270Q6UE05 265 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 LCLAT1Q6UWP7 414 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 C4orf50Q6ZRC1 276 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 SLC4A11Q8NBS3 891 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 SLC16A11Q8NCK7 471 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 OR8K1Q8NGG5 319 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 OR10T2Q8NGX3 314 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ZNF461Q8TAF7 563 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 HDAC7Q8WUI4 952 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 KAT5Q92993 513 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 B3GALT6Q96L58 329 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 PANX2Q96RD6 677 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CDCA3Q99618 268 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 HNRNPABQ99729 332 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 SYT15Q9BQS2 421 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CLSTN3Q9BQT9 956 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 BTBD2Q9BX70 525 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 C1QTNF3Q9BXJ4 246 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ELOVL4Q9GZR5 314 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 MEGF9Q9H1U4 602 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 NLRC4Q9NPP4 1024 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ZNHIT6Q9NWK9 470 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 SAMD15Q9P1V8 674 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 HMGXB4Q9UGU5 601 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 ST6GALNAC2Q9UJ37 374 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 NOCTQ9UK39 431 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 AJAP1Q9UKB5 411 aaPredicted RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 TNPO3Q9Y5L0 923 aaKnown RBP6.05□□□□□ -1.44
SCAF11-213ENST00000550629 CDY1Q9Y6F8 540 aa6.05□□□□□ -1.44
SCAF11-213ENST00000550629 TSC2P49815 1807 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TRIP11Q15643 1979 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 LRRC53A6NM62 1247 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 O00370 1275 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 TEX28O15482 410 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 MFAP3LO75121 409 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 GFPT2O94808 682 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ASMTLO95671 621 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 ASLP04424 464 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 SERPING1P05155 500 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 POU2F2P09086 479 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 PDGFRBP09619 1106 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 CYP11B1P15538 503 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 SDHAP31040 664 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 OR1D2P34982 312 aa6.04□□□□□ -1.44
SCAF11-213ENST00000550629 KRT9P35527 623 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms