RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 CCDC106Q9BWC9 280 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 TMEM216Q9P0N5 145 aa11.31□□□□□ -0.6
LINC00661-204ENST00000549354 COL4A4P53420 1690 aaPredicted RBP11.31□□□□□ -0.6
LINC00661-204ENST00000549354 SIN3BO75182 1162 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 CYP11A1P05108 521 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 ARRB2P32121 409 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 APLP1P51693 650 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 GK3PQ14409 553 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 BOLA3Q53S33 107 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SPDYAQ5MJ70 313 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 CERCAMQ5T4B2 595 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 KIAA0319Q5VV43 1072 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 WSCD1Q658N2 575 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 MFN1Q8IWA4 741 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 PLD6Q8N2A8 252 aaKnown RBP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 LPPQ93052 612 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SLC45A3Q96JT2 553 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 TRMT13Q9NUP7 481 aaKnown RBP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 PAK5Q9P286 719 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 HSPA4LO95757 839 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 CHRNGP07510 517 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 IL4RP24394 825 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 CLCNKBP51801 687 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 COPAP53621 1224 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 ADIGQ0VDE8 80 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SEPT6Q14141 434 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 PDK2Q15119 407 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 PCSK7Q16549 785 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 TEX44Q53QW1 395 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 FRMD7Q6ZUT3 714 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 NET1Q7Z628 596 aaPredicted RBP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 PIWIL2Q8TC59 973 aaKnown RBP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 NAT14Q8WUY8 206 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SEZ6LQ9BYH1 1024 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 NUF2Q9BZD4 464 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SEMA6AQ9H2E6 1030 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SYBUQ9NX95 663 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 PCDH10Q9P2E7 1040 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 V9GYQ6 96 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 TSC2P49815 1807 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 M0QYT0 321 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 MDM4O15151 490 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 TPST1O60507 370 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 GRIA2P42262 883 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SULT1E1P49888 294 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 FAM189BP81408 668 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 TFDP2Q14188 446 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 DHDDSQ86SQ9 333 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 MYLK4Q86YV6 388 aaPredicted RBP11.3□□□□□ -0.6
LINC00661-204ENST00000549354 DEFB106AQ8N104 65 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SLAIN1Q8ND83 568 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 C3orf58Q8NDZ4 430 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 B4GALNT2Q8NHY0 566 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 SLC7A14Q8TBB6 771 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 UROC1Q96N76 676 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 RGS18Q9NS28 235 aa11.3□□□□□ -0.6
LINC00661-204ENST00000549354 ATP6AP2A0A1C7CYW4 349 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 TMEM233B4DJY2 109 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SCAMP3O14828 347 aaKnown RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ATP6AP2O75787 350 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 CSPG5O95196 566 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SCNN1GP51170 649 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 RPS6KA3P51812 740 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 HDAC4P56524 1084 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 MAP3K7CLP57077 242 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 LIN52Q52LA3 116 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 RAET1EQ8TD07 263 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NT5C3BQ969T7 300 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 IFT43Q96FT9 208 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NDNQ99608 321 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 GORASP1Q9BQQ3 440 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 TRIM8Q9BZR9 551 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 S100A14Q9HCY8 104 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PRM3Q9NNZ6 103 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 CRTAC1Q9NQ79 661 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SIRPGQ9P1W8 387 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 NEMP2A6NFY4 417 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 M0QZQ0 153 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 MFSD11O43934 449 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 MAGEC1O60732 1142 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ALDOAP04075 364 aaKnown RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 CKBP12277 381 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ARL1P40616 181 aaPredicted RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 RAP1GDS1P52306 607 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 DEUP1Q05D60 604 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 TBL3Q12788 808 aaKnown RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PDE1CQ14123 709 aaPredicted RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 POU6F1Q14863 301 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 DNAL1Q4LDG9 190 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 HABP4Q5JVS0 413 aaKnown RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 SYPL2Q5VXT5 272 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 PDPK2PQ6A1A2 396 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 LDB1Q86U70 411 aaPredicted RBP11.29□□□□□ -0.6
LINC00661-204ENST00000549354 ATP2A3Q93084 1043 aa11.29□□□□□ -0.6
LINC00661-204ENST00000549354 B3GALT6Q96L58 329 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms