RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 C6orf222P0C671 652 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 COX4I1P13073 169 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ATF4P18848 351 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 GLDCP23378 1020 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TYK2P29597 1187 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PNPLA4P41247 253 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 NPY2RP49146 381 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TUBP50607 506 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 LIMK2P53671 638 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 BCAT1P54687 386 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 POLE2P56282 527 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PDE1BQ01064 536 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 SP2Q02086 613 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 BST2Q10589 180 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TBL3Q12788 808 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PRKAA1Q13131 559 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 CCNIQ14094 377 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PDE1CQ14123 709 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PCLAFQ15004 111 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 R3HDM1Q15032 1099 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PDK3Q15120 406 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 UGP2Q16851 508 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 CNPY1Q3B7I2 92 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 LRRC23Q53EV4 343 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 CELF3Q5SZQ8 465 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 MROH9Q5TGP6 573 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 RNF220Q5VTB9 566 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ITPRIPL1Q6GPH6 555 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 NPNTQ6UXI9 565 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 SCARA5Q6ZMJ2 495 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TRMT1LQ7Z2T5 733 aaKnown RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ZNF410Q86VK4 478 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PGAM4Q8N0Y7 254 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 KYQ8NBH2 561 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 MIPOL1Q8TD10 442 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 SLC26A7Q8TE54 656 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 NAT14Q8WUY8 206 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 SLC35F5Q8WV83 523 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ELMO3Q96BJ8 720 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 GPR20Q99678 358 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 IL22Q9GZX6 179 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 ILKAPQ9H0C8 392 aaPredicted RBP6.6□□□□□ -1.35
SNHG1-225ENST00000545920 LRRC4Q9HBW1 653 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 SMYD2Q9NRG4 433 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 BFARQ9NZS9 450 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 EPS15L1Q9UBC2 864 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 EMCNQ9ULC0 261 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PPM1HQ9ULR3 514 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 AP4E1Q9UPM8 1137 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 DMTF1Q9Y222 760 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 POMPQ9Y244 141 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 RAP2CQ9Y3L5 183 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 DTNAQ9Y4J8 743 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 PHIPQ8WWQ0 1821 aa6.6□□□□□ -1.35
SNHG1-225ENST00000545920 TRPC5OSA6NMA1 111 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 LACTBL1A8MY62 500 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 ZBTB42B2RXF5 422 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 INO80B-WBP1J3KQ70 363 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PIK3R2O00459 728 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 TPP1O14773 563 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HDAC3O15379 428 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HSPA4LO95757 839 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 ITGB3P05106 788 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PFKMP08237 780 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SRGAP2CP0DJJ0 459 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HSPA1AP0DMV8 641 aaKnown RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HSPA1BP0DMV9 641 aaKnown RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CXCL8P10145 99 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 VAV1P15498 845 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 ITGAXP20702 1163 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CDC25CP30307 473 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HTR7P34969 479 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SERPINB6P35237 376 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PPARGP37231 505 aaPredicted RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 NDST1P52848 882 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 NR1H2P55055 460 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 HDAC4P56524 1084 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SP4Q02446 784 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 TRAP1Q12931 704 aaKnown RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 KLF10Q13118 480 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PPIL2Q13356 520 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SNAPC2Q13487 334 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 LAMB3Q13751 1172 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 PAFAH1B3Q15102 231 aaKnown RBP6.59□□□□□ -1.35
SNHG1-225ENST00000545920 GOLGA7BQ2TAP0 167 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 SLC25A52Q3SY17 297 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 FOXB2Q5VYV0 432 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 JADE1Q6IE81 842 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 KLC3Q6P597 504 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 KCNT2Q6UVM3 1135 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 UGT2A3Q6UWM9 527 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 B3GNT6Q6ZMB0 384 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CLEC14AQ86T13 490 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 LINC00523Q86TU6 105 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 TMEM135Q86UB9 458 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 KLHDC8BQ8IXV7 354 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 CRYBG2Q8N1P7 616 aa6.59□□□□□ -1.35
SNHG1-225ENST00000545920 LINC01465Q8N7H1 131 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms