RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 FRMD1Q8N878 549 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 TPCN2Q8NHX9 752 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 RLN3Q8WXF3 142 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 SIPA1Q96FS4 1042 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 CALR3Q96L12 384 aaKnown RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 ZNF670Q9BS34 389 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 CEP44Q9C0F1 390 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 SLC39A8Q9C0K1 460 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 DUSP15Q9H1R2 295 aaPredicted RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 PDFQ9HBH1 243 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 ETNK2Q9NVF9 386 aa19.53■□□□□ 0.72
DDX55-211ENST00000544429 SMG5Q9UPR3 1016 aaKnown RBP19.53■□□□□ 0.72
DDX55-211ENST00000544429 NUMA1Q14980 2115 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 SDK1Q7Z5N4 2213 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 ZSCAN5CA6NGD5 496 aaPredicted RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 C3orf70A6NLC5 250 aaPredicted RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 ZNF487B1APH4 448 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 MCF2LO15068 1137 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 ALOX15BO15296 676 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 ZBTB24O43167 697 aaPredicted RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 BCKDHBP21953 392 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 COMTP21964 271 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 AMPD1P23109 780 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 TPMTP51580 245 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 GEMIN4P57678 1058 aaKnown RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 MMRN1Q13201 1228 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 BYSLQ13895 437 aaKnown RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 PLK5Q496M5 336 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 C22orf39Q6P5X5 142 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 Q6ZVU0 165 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 KBTBD6Q86V97 674 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 C11orf74Q86VG3 221 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 VSIG1Q86XK7 387 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 LRRC8AQ8IWT6 810 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 PLPP6Q8IY26 295 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 PGBD3Q8N328 593 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 FAM160A2Q8N612 972 aaPredicted RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 ATP11CQ8NB49 1132 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 CCDC112Q8NEF3 446 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 OR2A12Q8NGT7 310 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 PRCCQ92733 491 aaPredicted RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 VOPP1Q96AW1 172 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 ISG20Q96AZ6 181 aaKnown RBP19.52■□□□□ 0.72
DDX55-211ENST00000544429 FAM122AQ96E09 287 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 MFHAS1Q9Y4C4 1052 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 ACTL7AQ9Y615 435 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 ALG6Q9Y672 507 aa19.52■□□□□ 0.72
DDX55-211ENST00000544429 FAM186AA6NE01 2351 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 WDR87Q6ZQQ6 2873 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 DAPK3O43293 454 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 SSR1P43307 286 aaKnown RBP19.51■□□□□ 0.71
DDX55-211ENST00000544429 NOP2P46087 812 aaKnown RBP19.51■□□□□ 0.71
DDX55-211ENST00000544429 ZNF776Q68DI1 518 aaPredicted RBP19.51■□□□□ 0.71
DDX55-211ENST00000544429 STK40Q8N2I9 435 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 PCDH19Q8TAB3 1148 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 RAPGEF5Q92565 580 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 FAM131CQ96AQ9 280 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 DESI2Q9BSY9 194 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 HPCAL4Q9UM19 191 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 SCML1Q9UN30 329 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 INVSQ9Y283 1065 aa19.51■□□□□ 0.71
DDX55-211ENST00000544429 EP300Q09472 2414 aaPredicted RBP19.5■□□□□ 0.71
DDX55-211ENST00000544429 A0A0U1RQJ8 604 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 C10orf142B7Z368 130 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 ARHGAP6O43182 974 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 PRAMEF11O60813 436 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 KDELR1P24390 212 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 MRE11P49959 708 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 KRT81Q14533 505 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 CST6Q15828 149 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 ACCSLQ4AC99 568 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 INO80DQ53TQ3 878 aaPredicted RBP19.5■□□□□ 0.71
DDX55-211ENST00000544429 SPDYCQ5MJ68 293 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 PMS2CLQ68D20 193 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 LAIR1Q6GTX8 287 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 KIAA1324Q6UXG2 1013 aaKnown RBP19.5■□□□□ 0.71
DDX55-211ENST00000544429 TP53INP2Q8IXH6 220 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 RHOT1Q8IXI2 618 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 PCDH20Q8N6Y1 951 aaKnown RBP19.5■□□□□ 0.71
DDX55-211ENST00000544429 CASKIN2Q8WXE0 1202 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 CELF6Q96J87 481 aaKnown RBP19.5■□□□□ 0.71
DDX55-211ENST00000544429 LOXL4Q96JB6 756 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 SPACA7Q96KW9 195 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 GOLPH3Q9H4A6 298 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 KLHL11Q9NVR0 708 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 WSB2Q9NYS7 404 aaPredicted RBP19.5■□□□□ 0.71
DDX55-211ENST00000544429 PPM1HQ9ULR3 514 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 HYOU1Q9Y4L1 999 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 ADGRG1Q9Y653 693 aa19.5■□□□□ 0.71
DDX55-211ENST00000544429 ARHGAP42A6NI28 874 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 GJC1P36383 396 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 PAPOLAP51003 745 aaKnown RBP19.49■□□□□ 0.71
DDX55-211ENST00000544429 CCZ1BP86790 482 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 CCZ1P86791 482 aaPredicted RBP19.49■□□□□ 0.71
DDX55-211ENST00000544429 PAFAH1B3Q15102 231 aaKnown RBP19.49■□□□□ 0.71
DDX55-211ENST00000544429 TAZQ16635 292 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 ANKRD20A8PQ5CZ79 823 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 TMCO3Q6UWJ1 677 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 USP30Q70CQ3 517 aa19.49■□□□□ 0.71
DDX55-211ENST00000544429 CEP68Q76N32 757 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms