RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 APOC1P02654 83 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ABCB4P21439 1286 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 CCNE1P24864 410 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PAFAH1B1P43034 410 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MRPS25P82663 173 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 GARNL3Q5VVW2 1013 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SLC9A4Q6AI14 798 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 Q6ZNX1 250 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MB21D2Q8IYB1 491 aaPredicted RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MICU2Q8IYU8 434 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 KRT78Q8N1N4 520 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF454Q8N9F8 522 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 THAP3Q8WTV1 239 aaPredicted RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 NEURL2Q9BR09 285 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 NTMT1Q9BV86 223 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 KCNN2Q9H2S1 579 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SUCOQ9UBS9 1254 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PXDNQ92626 1479 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 A0A0A0MRY4 1105 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 LRRC14BA6NHZ5 514 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 FOXN1O15353 648 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 AKR7A3O95154 331 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 FTCDO95954 541 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 LCKP06239 509 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 OGNP20774 298 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 TGM1P22735 817 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ITGB8P26012 769 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 IREB2P48200 963 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 BCAMP50895 628 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 EIF3EP60228 445 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 RPS26P62854 115 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ABATP80404 500 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 GLO1Q04760 184 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 CDC20Q12834 499 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ZNF267Q14586 743 aaPredicted RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 RETSATQ6NUM9 610 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 TXNDC11Q6PKC3 985 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 RBM44Q6ZP01 1051 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PIGWQ7Z7B1 504 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MCUR1Q96AQ8 359 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 AIDAQ96BJ3 306 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 DBNLQ9UJU6 430 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 AFF2P51816 1311 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 E9PBE3 544 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PLA2G6O60733 806 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 DAB1O75553 588 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PALMO75781 387 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MYO1DO94832 1006 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PGM3O95394 542 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MLYCDO95822 493 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PSMA2P25787 234 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 S100A7P31151 101 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 TCTE1Q5JU00 501 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 PM20D1Q6GTS8 502 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SYDE1Q6ZW31 735 aaPredicted RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ARMCX2Q7L311 632 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 KCNK18Q7Z418 384 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 TTC7BQ86TV6 843 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ZBED8Q8IZ13 594 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 BBS5Q8N3I7 341 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SRBD1Q8N5C6 995 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MCPH1Q8NEM0 835 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ACTRT2Q8TDY3 377 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SLC5A11Q8WWX8 675 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 LRRC39Q96DD0 335 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 KLF6Q99612 283 aaPredicted RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 MKRN2Q9H000 416 aaKnown RBP9.03□□□□□ -0.96
VPS13D-212ENST00000543766 TOR3AQ9H497 397 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SEC31BQ9NQW1 1179 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ANLNQ9NQW6 1124 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ARHGAP28Q9P2N2 729 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 ERGIC3Q9Y282 383 aa9.03□□□□□ -0.96
VPS13D-212ENST00000543766 SCN11AQ9UI33 1791 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 GATCO43716 136 aaKnown RBP9.02□□□□□ -0.96
VPS13D-212ENST00000543766 ADAM11O75078 769 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 CYP11A1P05108 521 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 FABP1P07148 127 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 ACADSP16219 412 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 CAP1Q01518 475 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 ITIH4Q14624 930 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 USP10Q14694 798 aaKnown RBP9.02□□□□□ -0.96
VPS13D-212ENST00000543766 TUSC1Q2TAM9 212 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 TMEM31Q5JXX7 168 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 KRT28Q7Z3Y7 464 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 PSTKQ8IV42 348 aaKnown RBP9.02□□□□□ -0.96
VPS13D-212ENST00000543766 NKAIN3Q8N8D7 197 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 OR52N1Q8NH53 320 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 PLEKHO2Q8TD55 490 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 DDX1Q92499 740 aaKnown RBP9.02□□□□□ -0.96
VPS13D-212ENST00000543766 FIG4Q92562 907 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 UBXN10Q96LJ8 280 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 TAF1DQ9H5J8 278 aaPredicted RBP9.02□□□□□ -0.96
VPS13D-212ENST00000543766 ECT2Q9H8V3 914 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 AAASQ9NRG9 546 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 TDP1Q9NUW8 608 aa9.02□□□□□ -0.96
VPS13D-212ENST00000543766 C1orf167Q5SNV9 1468 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 MYH7BA7E2Y1 1941 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms