RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 BST1Q10588 318 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 BFSP2Q13515 415 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 ESCO2Q56NI9 601 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 HABP4Q5JVS0 413 aaKnown RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 PPP1R26Q5T8A7 1209 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 C11orf63Q6NUN7 778 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 LRRC71Q8N4P6 559 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 ZCCHC9Q8N567 271 aaKnown RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CMASQ8NFW8 434 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 FNIP1Q8TF40 1166 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 S100ZQ8WXG8 99 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CNDP2Q96KP4 475 aaKnown RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 DBNDD1Q9H9R9 158 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 DIABLOQ9NR28 239 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 KCTD5Q9NXV2 234 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 TMEM216Q9P0N5 145 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 FNIP2Q9P278 1114 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 JAG2Q9Y219 1238 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 ZNF532Q9HCE3 1301 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 A0A0B4J269 797 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CENPXA8MT69 81 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 PI4K2BG5E9Z4 385 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 NFKBIEO00221 500 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CTDSP2O14595 271 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 TOR1BO14657 336 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 RAD51BO15315 384 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CLDN3O15551 220 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 HTRA2O43464 458 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 KRT7P08729 469 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 BMP4P12644 408 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 SPNP16150 400 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 COMTP21964 271 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 FGFR3P22607 806 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 HSD17B2P37059 387 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 GRIK1P39086 918 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 QARSP47897 775 aaKnown RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 TNK2Q07912 1038 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 TUBB3Q13509 450 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 GALNT3Q14435 633 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CEP55Q53EZ4 464 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 SMYD5Q6GMV2 418 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 SYDE1Q6ZW31 735 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CDR2LQ86X02 465 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 CPNE8Q86YQ8 564 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 FANK1Q8TC84 345 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 RAB2BQ8WUD1 216 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 MARVELD3Q96A59 401 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 SEMA6AQ9H2E6 1030 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 DUS2Q9NX74 493 aaKnown RBP9.62□□□□□ -0.87
CLIP1-214ENST00000540539 TAS2R14Q9NYV8 317 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 MTRRQ9UBK8 725 aa9.62□□□□□ -0.87
CLIP1-214ENST00000540539 MYO3BQ8WXR4 1341 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 LRRIQ4A6NIV6 560 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 TSPAN4O14817 238 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 AKAP10O43572 662 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 FAM189A1O60320 539 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 DLGAP3O95886 979 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 TP53P04637 393 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 XRCC1P18887 633 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 UQCRC1P31930 480 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 RPL9P32969 192 aaKnown RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 MSX2P35548 267 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 TNFAIP2Q03169 654 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 ENPEPQ07075 957 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 KCNH2Q12809 1159 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 NHSL2Q5HYW2 709 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 FAM47AQ5JRC9 791 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 EFHC2Q5JST6 749 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 BRMS1LQ5PSV4 323 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 METTL11BQ5VVY1 283 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 GTF2IRD2BQ6EKJ0 949 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 NEK8Q86SG6 692 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 GTF2IRD2Q86UP8 949 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 KIAA1958Q8N8K9 716 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 BHLHE22Q8NFJ8 381 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 OR7D4Q8NG98 312 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 SLC2A14Q8TDB8 520 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 SEPT1Q8WYJ6 367 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 KLHL32Q96NJ5 620 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 OPALINQ96PE5 141 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 HOMER2Q9NSB8 354 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 BMP2KQ9NSY1 1161 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 TCAF1Q9Y4C2 921 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 BAZ2BQ9UIF8 2168 aaKnown RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 LOC100653049A0A140TA62 436 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 NCAM2O15394 837 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 DAB1O75553 588 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 KRT34O76011 436 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 IL18RAPO95256 599 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 VNN1O95497 513 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 NDST3O95803 873 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 IFI30P13284 250 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 NPY2RP49146 381 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 DBPQ10586 325 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 AQP6Q13520 282 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 AASDHQ4L235 1098 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-214ENST00000540539 PM20D1Q6GTS8 502 aa9.61□□□□□ -0.87
CLIP1-214ENST00000540539 TTBK2Q6IQ55 1244 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms