RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 H2AFVQ71UI9 128 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 AADATQ8N5Z0 425 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 TNKS2Q9H2K2 1166 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 ZWILCHQ9H900 591 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 CTTNBP2NLQ9P2B4 639 aa18.7■□□□□ 0.58
SNRPA1-203ENST00000540017 MYO1FO00160 1098 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 RNF103O00237 685 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 EEF2KO00418 725 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 BNIP3LO60238 219 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 GDF9O60383 454 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 RNASEH1O60930 286 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 TMEM253P0C7T8 217 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 SERPINH1P50454 418 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 SLC25A11Q02978 314 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 POLD3Q15054 466 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 PPP6R3Q5H9R7 873 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 RETSATQ6NUM9 610 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 C22orf39Q6P5X5 142 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 PSTKQ8IV42 348 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 UMODL1-AS1Q8N2C9 162 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 OR2A12Q8NGT7 310 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 CTNNBL1Q8WYA6 563 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 HMCESQ96FZ2 354 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 NCAPGQ9BPX3 1015 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 NEUROG2Q9H2A3 272 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 C6orf106Q9H6K1 298 aaPredicted RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 CATSPERBQ9H7T0 1116 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 OSGEPQ9NPF4 335 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 VPS45Q9NRW7 570 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 FBXL12Q9NXK8 326 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 CWC15Q9P013 229 aaKnown RBP18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 PILRBQ9UKJ0 227 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 DCHS1Q96JQ0 3298 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 GON4LQ3T8J9 2241 aa18.69■□□□□ 0.58
SNRPA1-203ENST00000540017 A0A1W2PP55 124 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 EIF3CLB5ME19 914 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 RASA4BC9J798 803 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 PLK4O00444 970 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 MCF2LO15068 1137 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 FGF10O15520 208 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 RASA4O43374 803 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 IL1BP01584 269 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 CTSLP07711 333 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 RARAP10276 462 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 MAOBP27338 520 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 HTR7P34969 479 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 ETFBP38117 255 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 CLCN6P51797 869 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 TTC31Q49AM3 519 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 PEAR1Q5VY43 1037 aaPredicted RBP18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 RFX8Q6ZV50 586 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 USP30Q70CQ3 517 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 SYT12Q8IV01 421 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 NETO2Q8NC67 525 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 CHST14Q8NCH0 376 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 OR8D1Q8WZ84 308 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 HSPH1Q92598 858 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 EIF3CQ99613 913 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 UVRAGQ9P2Y5 699 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 PPM1HQ9ULR3 514 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 SCML1Q9UN30 329 aa18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 FCF1Q9Y324 198 aaKnown RBP18.68■□□□□ 0.58
SNRPA1-203ENST00000540017 KDELR3O43731 214 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 ERCC2P18074 760 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 DRD3P35462 400 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 SLC20A2Q08357 652 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 SERINC3Q13530 473 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 DPYSQ14117 519 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 DPYSL2Q16555 572 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 POM121L1PQ3SYA9 428 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 BOLA3Q53S33 107 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 HDDC3Q8N4P3 179 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 CADM4Q8NFZ8 388 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 SLC35G2Q8TBE7 412 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 GANCQ8TET4 914 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 BTBD1Q9H0C5 482 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 LRRC19Q9H756 370 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 MFHAS1Q9Y4C4 1052 aa18.67■□□□□ 0.58
SNRPA1-203ENST00000540017 METTL12A8MUP2 240 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 ALOX15BO15296 676 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 RNASEH2AO75792 299 aaKnown RBP18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 PROSCO94903 275 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 SEMA4FO95754 770 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 ADH1BP00325 375 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 C5AR1P21730 350 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 HCAR3P49019 387 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 YBEYP58557 167 aaPredicted RBP18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 TAS2R40P59535 323 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 IRX4P78413 519 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 LMNB2Q03252 620 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 ATP13A4Q4VNC1 1196 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 DCAF12L1Q5VU92 463 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 DPY19L3Q6ZPD9 716 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 POLNQ7Z5Q5 900 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 NPWQ8N729 165 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 PIP4K2CQ8TBX8 421 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 TEKT4Q8WW24 435 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 FOXJ1Q92949 421 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 RMDN1Q96DB5 314 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms