RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 NXPE4Q6UWF7 544 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 BTLAQ7Z6A9 289 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PRPF39Q86UA1 669 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 KBTBD6Q86V97 674 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 NUDCD3Q8IVD9 361 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 WDR75Q8IWA0 830 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 UBR7Q8N806 425 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 GLIS1Q8NBF1 620 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 TMEM35BQ8NCS4 154 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 ICA1LQ8NDH6 482 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PRSS33Q8NF86 280 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 ADCY4Q8NFM4 1077 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 CMASQ8NFW8 434 aaPredicted RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 RSAD2Q8WXG1 361 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 RTP4Q96DX8 246 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PLEKHG4BQ96PX9 1271 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SRPK1Q96SB4 655 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 KCNK16Q96T55 309 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 THTPAQ9BU02 230 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SPON2Q9BUD6 331 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 BCO2Q9BYV7 579 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 IQCGQ9H095 443 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PDZD7Q9H5P4 517 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 CYP26B1Q9NR63 512 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 DNAJC28Q9NX36 388 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 GALNT8Q9NY28 637 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PPARGC1AQ9UBK2 798 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PRPF19Q9UMS4 504 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PSMD13Q9UNM6 376 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 DMTF1Q9Y222 760 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SH3BP1Q9Y3L3 701 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 PCDHB12Q9Y5F1 795 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 CDY2AQ9Y6F7 541 aa7.83□□□□□ -1.16
CCDC60-204ENST00000539847 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.83□□□□□ -1.16
CCDC60-204ENST00000539847 CFAP54Q96N23 3096 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 C5orf42Q9H799 3197 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 FAM237BA0A1B0GVD1 139 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TCRBV9S1A1TA0A576 114 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 WDR91A4D1P6 747 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 EIF4E1BA6NMX2 242 aaKnown RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 H3BNX3 289 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 H3BRJ5 948 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 APOC4-APOC2K7ER74 178 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 OPHN1O60890 802 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ENDOD1O94919 500 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TNFAIP8O95379 198 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 BAG2O95816 211 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 GLP2RO95838 553 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 HLA-DRAP01903 254 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 APOC2P02655 101 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 C1QAP02745 245 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ENO1P06733 434 aaKnown RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 CD48P09326 243 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ZSCAN5DPP0CG00 497 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 HARSP12081 509 aaKnown RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 CD58P19256 250 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 PROZP22891 400 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 SSTR1P30872 391 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 POLR2BP30876 1174 aaKnown RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 YWHABP31946 246 aaKnown RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 L1CAMP32004 1257 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 FDFT1P37268 417 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 NPTX2P47972 431 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ACADVLP49748 655 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 HK2P52789 917 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 NR1H2P55055 460 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 PEX3P56589 373 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TMPRSS15P98073 1019 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 KRT76Q01546 638 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 BST1Q10588 318 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 DMP1Q13316 513 aaPredicted RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 MSLNQ13421 630 aaPredicted RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 SPIDRQ14159 915 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 KCNJ11Q14654 390 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TRIP4Q15650 581 aaPredicted RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 MMEL1Q495T6 779 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 RABGAP1LQ5R372 815 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ACBD5Q5T8D3 534 aaPredicted RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ARMC3Q5W041 872 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 C1orf228Q6PIY5 440 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 PLPPR4Q7Z2D5 763 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TRIM74Q86UV6 250 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TRIM73Q86UV7 250 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 RHPN2Q8IUC4 686 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 NUP93Q8N1F7 819 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 SLC4A11Q8NBS3 891 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 MCPH1Q8NEM0 835 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 POF1BQ8WVV4 589 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 DNAJB3Q8WWF6 145 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 LINC01599Q8WXQ3 324 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 RSPH1Q8WYR4 309 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 KAT6AQ92794 2004 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 CCDC127Q96BQ5 260 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 ASIC4Q96FT7 647 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 SERAC1Q96JX3 654 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 FAM111AQ96PZ2 611 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 TTC1Q99614 292 aa7.82□□□□□ -1.16
CCDC60-204ENST00000539847 GCOM2Q9BZD3 368 aaPredicted RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 INO80BQ9C086 356 aaPredicted RBP7.82□□□□□ -1.16
CCDC60-204ENST00000539847 LHX5Q9H2C1 402 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms