RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ALDH1A2O94788 518 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 CA4P22748 312 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 MAPKAPK2P49137 400 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 NPY2RP49146 381 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 GEMP55040 296 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 WDR4P57081 412 aaKnown RBP22.86■■□□□ 1.25
HOMER3-204ENST00000539827 UBE2Q1Q7Z7E8 422 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 LRRC34Q8IZ02 419 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 DENND1AQ8TEH3 1009 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 CKAP2Q8WWK9 683 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 CYP2S1Q96SQ9 504 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 UXTQ9UBK9 157 aaPredicted RBP22.86■■□□□ 1.25
HOMER3-204ENST00000539827 ZNF180Q9UJW8 692 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 INSL6Q9Y581 213 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 ANAPC1Q9H1A4 1944 aa22.86■■□□□ 1.25
HOMER3-204ENST00000539827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.85■■□□□ 1.25
HOMER3-204ENST00000539827 F11P03951 625 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 POLBP06746 335 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 MBL2P11226 248 aaPredicted RBP22.85■■□□□ 1.25
HOMER3-204ENST00000539827 CREMQ03060 361 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 SLC10A7Q0GE19 358 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 BMPR2Q13873 1038 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 C5orf22Q49AR2 442 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 SPANXN3Q5MJ09 141 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 TMC7Q7Z402 723 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 ZNF669Q96BR6 464 aaPredicted RBP22.85■■□□□ 1.25
HOMER3-204ENST00000539827 TSPAN3O60637 253 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 PMPCBO75439 489 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 PPP3CCP48454 512 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 MAXP61244 160 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 RPS24P62847 133 aaKnown RBP22.85■■□□□ 1.25
HOMER3-204ENST00000539827 ITKQ08881 620 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 CDH17Q12864 832 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 HNRNPDQ14103 355 aaKnown RBP22.85■■□□□ 1.25
HOMER3-204ENST00000539827 SLC1A5Q15758 541 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 MARC1Q5VT66 337 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 CYS1Q717R9 158 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 CPLX4Q7Z7G2 160 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 LINC00523Q86TU6 105 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 GPR65Q8IYL9 337 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 TTC17Q96AE7 1141 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 ALPK3Q96L96 1907 aa22.85■■□□□ 1.25
HOMER3-204ENST00000539827 PLXNA4Q9HCM2 1894 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 LCHNA4D1U4 455 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 VIMP08670 466 aaKnown RBP22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SNRPAP09012 282 aaKnown RBP22.84■■□□□ 1.25
HOMER3-204ENST00000539827 ETFBP38117 255 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 RENBPP51606 427 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SGSHP51688 502 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 NIPAL4Q0D2K0 466 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SERINC3Q13530 473 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 PARP15Q460N3 678 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 KDELC2Q7Z4H8 507 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 ITIH5Q86UX2 942 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 C7orf61Q8IZ16 206 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 CLP1Q92989 425 aaKnown RBP22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SGSM3Q96HU1 749 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 PRICKLE1Q96MT3 831 aaPredicted RBP22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SLC22A12Q96S37 553 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 IL21Q9HBE4 155 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 AGO1Q9UL18 857 aaKnown RBP22.84■■□□□ 1.25
HOMER3-204ENST00000539827 MAFFQ9ULX9 164 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SSX2IPQ9Y2D8 614 aa22.84■■□□□ 1.25
HOMER3-204ENST00000539827 SCAMP3O14828 347 aaKnown RBP22.83■■□□□ 1.25
HOMER3-204ENST00000539827 KRT37O76014 449 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 ERVK-10P10266 1014 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 PYGBP11216 843 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 YBEYP58557 167 aaPredicted RBP22.83■■□□□ 1.25
HOMER3-204ENST00000539827 TXNDC8Q6A555 127 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 RASSF3Q86WH2 238 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 BANPQ8N9N5 519 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 NSMCE1Q8WV22 266 aa22.83■■□□□ 1.25
HOMER3-204ENST00000539827 C12orf65Q9H3J6 166 aaKnown RBP22.83■■□□□ 1.25
HOMER3-204ENST00000539827 ALG13Q9NP73 1137 aaKnown RBP22.83■■□□□ 1.25
HOMER3-204ENST00000539827 SSU72Q9NP77 194 aaKnown RBP22.83■■□□□ 1.25
HOMER3-204ENST00000539827 MKI67P46013 3256 aaKnown RBP22.83■■□□□ 1.25
HOMER3-204ENST00000539827 TTC24A2A3L6 582 aaPredicted RBP22.83■■□□□ 1.24
HOMER3-204ENST00000539827 TCP11X1B4DZS4 312 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 SYN1P17600 705 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 IL10RBQ08334 325 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 ANKRD20A4Q4UJ75 823 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 RABGAP1LQ5R372 815 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 LGSNQ5TDP6 509 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 MARK2Q7KZI7 788 aaKnown RBP22.83■■□□□ 1.24
HOMER3-204ENST00000539827 HERC6Q8IVU3 1022 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 HS6ST3Q8IZP7 471 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 ARL14EPQ8N8R7 260 aaPredicted RBP22.83■■□□□ 1.24
HOMER3-204ENST00000539827 OR52K2Q8NGK3 314 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 FATE1Q969F0 183 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 AZIN2Q96A70 460 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 SLC25A51Q9H1U9 297 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 CHRAC1Q9NRG0 131 aa22.83■■□□□ 1.24
HOMER3-204ENST00000539827 CCDC78A2IDD5 438 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 ASMTLO95671 621 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 SLC18A1P54219 525 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 CDH4P55283 916 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 ERVFC1P60507 584 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 MGAT5Q09328 741 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 PCSK7Q16549 785 aa22.82■■□□□ 1.24
HOMER3-204ENST00000539827 OR7D4Q8NG98 312 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms