RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 SMG9Q9H0W8 520 aaKnown RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 CERS4Q9HA82 394 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 SMYD2Q9NRG4 433 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 RBM22Q9NW64 420 aaKnown RBP eCLIP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 ZC3H7BQ9UGR2 993 aaKnown RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 CPQQ9Y646 472 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 MAD1L1Q9Y6D9 718 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 A6NNZ2 444 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 CXorf49A8MYA2 514 aaPredicted RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 RAMP2O60895 175 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 SUN1O94901 812 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 AGTP01019 485 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 SERINC3Q13530 473 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 TUBB8Q3ZCM7 444 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 KBTBD12Q3ZCT8 623 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 PABPC1LQ4VXU2 614 aaKnown RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 POTEHQ6S545 545 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 KLHDC8BQ8IXV7 354 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 EBNA1BP2Q99848 306 aaKnown RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 HTATIP2Q9BUP3 242 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 SLC46A2Q9BY10 475 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 XAB2Q9HCS7 855 aaKnown RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 LGALS13Q9UHV8 139 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 YBX2Q9Y2T7 364 aaKnown RBP11.33□□□□□ -0.6
CTCFL-212ENST00000539382 ASB3Q9Y575 518 aa11.33□□□□□ -0.6
CTCFL-212ENST00000539382 GBF1Q92538 1859 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 DENND4CQ5VZ89 1909 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CDH16O75309 829 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MYL4P12829 197 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MLNP12872 115 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 GLDCP23378 1020 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MAGEA10P43363 369 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MAXP61244 160 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CES3Q6UWW8 571 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CCDC149Q6ZUS6 474 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 PGBD5Q8N414 524 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 OR7D4Q8NG98 312 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 AZIN2Q96A70 460 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 PABPC5Q96DU9 382 aaKnown RBP11.32□□□□□ -0.6
CTCFL-212ENST00000539382 DHRS4Q9BTZ2 278 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 ATXN3LQ9H3M9 355 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 GLOD4Q9HC38 313 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 SYBUQ9NX95 663 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 EYSQ5T1H1 3165 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 UGT1A9O60656 530 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MOSPD3O75425 235 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 FAM155BO75949 473 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 TPH1P17752 444 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 HOXD9P28356 352 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-212ENST00000539382 LSP1P33241 339 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MMP13P45452 471 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 PPP2R2AP63151 447 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
CTCFL-212ENST00000539382 PPM1LQ5SGD2 360 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CERCAMQ5T4B2 595 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 ZNF697Q5TEC3 545 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 Q6ZNB5 142 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 LRRC49Q8IUZ0 686 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 RIN3Q8TB24 985 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
CTCFL-212ENST00000539382 LRRC39Q96DD0 335 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CCDC77Q9BR77 488 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 KIF9Q9HAQ2 790 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 UGT1A7Q9HAW7 530 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 UGT1A10Q9HAW8 530 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 UGT1A8Q9HAW9 530 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CASS4Q9NQ75 786 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 IL1RAPL1Q9NZN1 696 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 DNMT3BQ9UBC3 853 aaKnown RBP11.32□□□□□ -0.6
CTCFL-212ENST00000539382 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
CTCFL-212ENST00000539382 CHD5Q8TDI0 1954 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 MTCL1Q9Y4B5 1905 aaKnown RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 SDR42E2A6NKP2 422 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 GFRA2O00451 464 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 MUSKO15146 869 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 CLASP2O75122 1294 aaKnown RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 CPP00450 1065 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 PHBP35232 272 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 MAPKAPK2P49137 400 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 GEMIN4P57678 1058 aaKnown RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 NTHL1P78549 312 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 NIPAL4Q0D2K0 466 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 HNRNPDQ14103 355 aaKnown RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 MPP2Q14168 576 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 TMED2Q15363 201 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 SLC5A9Q2M3M2 681 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 PARP15Q460N3 678 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 FSCBQ5H9T9 825 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 ITPRIPL1Q6GPH6 555 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 TIGD7Q6NT04 549 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 KDELC2Q7Z4H8 507 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 ADGRD2Q7Z7M1 963 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 RBM23Q86U06 439 aaKnown RBP11.31□□□□□ -0.6
CTCFL-212ENST00000539382 ZNF354CQ86Y25 554 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 TDRPQ86YL5 185 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 SHKBP1Q8TBC3 707 aa11.31□□□□□ -0.6
CTCFL-212ENST00000539382 DCAKDQ8WVC6 231 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms