RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 KDELC2Q7Z4H8 507 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 ZNF467Q7Z7K2 595 aaPredicted RBP12.18□□□□□ -0.46
CPNE8-203ENST00000538596 FAM35AQ86V20 835 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 FBXW8Q8N3Y1 598 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 CNTD1Q8N815 330 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 KCTD4Q8WVF5 259 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 LPPQ93052 612 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 ACE2Q9BYF1 805 aaPredicted RBP12.18□□□□□ -0.46
CPNE8-203ENST00000538596 NUF2Q9BZD4 464 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 TCF7L2Q9NQB0 619 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 OXSMQ9NWU1 459 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
CPNE8-203ENST00000538596 GRIA4P48058 902 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 CDK7P50613 346 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 CLCNKBP51801 687 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ATXN3P54252 364 aaPredicted RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 NAGLUP54802 743 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 CTBP1Q13363 440 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 FAM219BQ5XKK7 198 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ISLR2Q6UXK2 745 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 PDSS2Q86YH6 399 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 DENND6AQ8IWF6 608 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ZSCAN18Q8TBC5 510 aaPredicted RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 MCMBPQ9BTE3 642 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 FTHL17Q9BXU8 183 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 WDCPQ9H6R7 721 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 DNAJB4Q9UDY4 337 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 PIGNO95427 931 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 MPOP05164 745 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 MYL4P12829 197 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 NUDT2P50583 147 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ADAM17P78536 824 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 MPP1Q00013 466 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 POU6F1Q14863 301 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 TRIP10Q15642 601 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 LSM12Q3MHD2 195 aaKnown RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 PAN2Q504Q3 1202 aaKnown RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ARL13AQ5H913 290 aaPredicted RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 RWDD4Q6NW29 188 aaKnown RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 AAGABQ6PD74 315 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 PDZD4Q76G19 769 aaPredicted RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 BHLHA9Q7RTU4 235 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 SNX32Q86XE0 403 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 RNF148Q8N7C7 305 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 PNPLA1Q8N8W4 532 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 NTAN1Q96AB6 310 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 SCYL1Q96KG9 808 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 PPP1R10Q96QC0 940 aaKnown RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 GAD1Q99259 594 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 OMDQ99983 421 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 C1QTNF1Q9BXJ1 281 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 SIK2Q9H0K1 926 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 TSPYL2Q9H2G4 693 aaPredicted RBP12.17□□□□□ -0.46
CPNE8-203ENST00000538596 MIOSQ9NXC5 875 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ZDHHC2Q9UIJ5 367 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 ARHGAP26Q9UNA1 814 aa12.17□□□□□ -0.46
CPNE8-203ENST00000538596 H3BNX3 289 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 DFFAO00273 331 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 AHSGP02765 367 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 MYL3P08590 195 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 GLDCP23378 1020 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 AXLP30530 894 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 GALNT2Q10471 571 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 SCAPQ12770 1279 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 DLG1Q12959 904 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 USP10Q14694 798 aaKnown RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TLK2Q86UE8 772 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 ZC3HC1Q86WB0 502 aaKnown RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 MFSD6LQ8IWD5 586 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 HDAC11Q96DB2 347 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TEKT5Q96M29 485 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 SLC9A7Q96T83 725 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 ILKAPQ9H0C8 392 aaPredicted RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 FAM96AQ9H5X1 160 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 FLRT1Q9NZU1 646 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 RUVBL2Q9Y230 463 aaKnown RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TMEM233B4DJY2 109 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 MATN2O00339 956 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 TIMM44O43615 452 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 SLC35E2BP0CK96 405 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 ARSAP15289 507 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 PIK3R1P27986 724 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 MTTPP55157 894 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 POLE2P56282 527 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 CDC42EP1Q00587 391 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 GSTA3Q16772 222 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 CEP97Q8IW35 865 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 RNF34Q969K3 372 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 SGF29Q96ES7 293 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 CATSPER2Q96P56 530 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 NR1H4Q96RI1 486 aaPredicted RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 ATXN3LQ9H3M9 355 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 PRDM16Q9HAZ2 1276 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 PAPOLBQ9NRJ5 636 aaKnown RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 SLC2A6Q9UGQ3 507 aa12.16□□□□□ -0.46
CPNE8-203ENST00000538596 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
CPNE8-203ENST00000538596 CASTOR2A6NHX0 329 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms