RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 NDUFB10O96000 172 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 APRTP07741 180 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 NR3C2P08235 984 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 PCSK1P29120 753 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 AP1S2P56377 157 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ALDH6A1Q02252 535 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ORC2Q13416 577 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 AMHR2Q16671 573 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 DCAF6Q58WW2 860 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ERMARDQ5T6L9 678 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 RASAL3Q86YV0 1011 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 TICAM1Q8IUC6 712 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 FBXW8Q8N3Y1 598 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 C10orf53Q8N6V4 93 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 IPMKQ8NFU5 416 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 FBXL8Q96CD0 374 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 OSBPL7Q9BZF2 842 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 CATSPERBQ9H7T0 1116 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ADPRHL2Q9NX46 363 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 UBA2Q9UBT2 640 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 CDY2AQ9Y6F7 541 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 SCAMP1O15126 338 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 GUCA1CO95843 209 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 CDH1P12830 882 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ITIH2P19823 946 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 PBLDP30039 288 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 HTR2BP41595 481 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 PDIA5Q14554 519 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 PDPK2PQ6A1A2 396 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ERO1BQ86YB8 467 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 MCFD2Q8NI22 146 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 CCDC120Q96HB5 630 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 SNX27Q96L92 541 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 APOL2Q9BQE5 337 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 COLEC11Q9BWP8 271 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 SEZ6LQ9BYH1 1024 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ZNF556Q9HAH1 456 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ERAP1Q9NZ08 941 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 POLG2Q9UHN1 485 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 VAV3Q9UKW4 847 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 NCAM1P13591 858 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 FEN1P39748 380 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 HK2P52789 917 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 XIAPP98170 497 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 GNA12Q03113 381 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 GALNT1Q10472 559 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 USP10Q14694 798 aaKnown RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 IGSF11Q5DX21 431 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 C10orf62Q5T681 223 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 HAGHLQ6PII5 290 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 CYP2U1Q7Z449 544 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 RNF148Q8N7C7 305 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 BHLHE22Q8NFJ8 381 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 FRMD8Q9BZ67 464 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 ALDH8A1Q9H2A2 487 aaPredicted RBP7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 EBF3Q9H4W6 596 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 MAGEE1Q9HCI5 957 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 SETD4Q9NVD3 440 aa7.07□□□□□ -1.28
TGFBR3-210ENST00000533089 MBL2P11226 248 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ACADMP11310 421 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FASP25445 335 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 NKX2-5P52952 324 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 PAPD7Q5XG87 772 aaKnown RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 NOTUMQ6P988 496 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ABRAXAS1Q6UWZ7 409 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 DEFB128Q7Z7B8 93 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 TIGD4Q8IY51 512 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 PDPRQ8NCN5 879 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 IRGQQ8WZA9 623 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 PRMT6Q96LA8 375 aaPredicted RBP7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 MRIQ9BWK5 157 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 KCTD5Q9NXV2 234 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 DPP3Q9NY33 737 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 PCDHGA11Q9Y5H2 935 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ATP6V1G2-DDX39BF2Z307 99 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 DDX3XO00571 662 aaKnown RBP eCLIP7.06□□□□□ -1.281e-7■■□□□ 12.3
TGFBR3-210ENST00000533089 RTN2O75298 545 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 RARAP10276 462 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 GRK3P35626 688 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 STILQ15468 1287 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 FUT11Q495W5 492 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 AMIGO1Q86WK6 493 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 COLGALT2Q8IYK4 626 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 NXNL1Q96CM4 212 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 TSPAN17Q96FV3 270 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ZNF333Q96JL9 665 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CAB39LQ9H9S4 337 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CRLS1Q9UJA2 301 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 IL18RAPO95256 599 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CCNE2O96020 404 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 IFNA7P01567 189 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 PRKAR1AP10644 381 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ODC1P11926 461 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 ERCC2P18074 760 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CHRM3P20309 590 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 BGNP21810 368 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CAPZA1P52907 286 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 CD83Q01151 205 aa7.06□□□□□ -1.28
TGFBR3-210ENST00000533089 BST2Q10589 180 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms