RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 K7ERQ8 282 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 SMAD6O43541 496 aaKnown RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ALDH1A2O94788 518 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 CD160O95971 181 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 SRCP12931 536 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 CTNNA2P26232 953 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 CTNNA1P35221 906 aaKnown RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 MARCKSL1P49006 195 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 PXNP49023 591 aaPredicted RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 PEX5P50542 639 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 PAPOLAP51003 745 aaKnown RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 CLCN6P51797 869 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 DLG2Q15700 870 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 TAZQ16635 292 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ACCSLQ4AC99 568 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ODF2Q5BJF6 829 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 C9orf64Q5T6V5 341 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 MFSD7Q6UXD7 560 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 TP53INP2Q8IXH6 220 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 RCOR2Q8IZ40 523 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ATP11CQ8NB49 1132 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 HMGB4Q8WW32 186 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 PTPRN2Q92932 1015 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ERLEC1Q96DZ1 483 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 MTG2Q9H4K7 406 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 PRDM16Q9HAZ2 1276 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 ZSCAN32Q9NX65 697 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 AMFRQ9UKV5 643 aa13.2□□□□□ -0.3
SMPD1-202ENST00000526280 CCDC66A2RUB6 948 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 ZBTB24O43167 697 aaPredicted RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 SIN3BO75182 1162 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 ZRANB2O95218 330 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 C7P10643 843 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 VAV1P15498 845 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 GABRG2P18507 467 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 SERPINB6P35237 376 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 CDKN2BP42772 138 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 FNTBP49356 437 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 SERPINH1P50454 418 aaKnown RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 COPAP53621 1224 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 PTPN5P54829 565 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 GEMIN4P57678 1058 aaKnown RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 NHLH1Q02575 133 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 PAFAH1B3Q15102 231 aaKnown RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 NCBP2-AS2Q69YL0 99 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 HEATR6Q6AI08 1181 aaKnown RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 PEX26Q7Z412 305 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 LONP2Q86WA8 852 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 C17orf53Q8N3J3 647 aaPredicted RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 ZBTB44Q8NCP5 570 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 MDGA1Q8NFP4 955 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 OR2T3Q8NH03 318 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 EXD1Q8NHP7 514 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 MRGPRX1Q96LB2 322 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 MAK16Q9BXY0 300 aaKnown RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 CEP44Q9C0F1 390 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 MKRN2Q9H000 416 aaKnown RBP13.19□□□□□ -0.3
SMPD1-202ENST00000526280 IRF2BPLQ9H1B7 796 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 FBRSQ9HAH7 460 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 ACTL7AQ9Y615 435 aa13.19□□□□□ -0.3
SMPD1-202ENST00000526280 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 J3KR12 359 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 DFFAO00273 331 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 AXIN1O15169 862 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 PRAMEF11O60813 436 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 ZNF821O75541 412 aaPredicted RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 FTCDO95954 541 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 NDUFV2P19404 249 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 SLC9A4Q6AI14 798 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 LEKR1Q6ZMV7 388 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 ARHGAP36Q6ZRI8 547 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 TMPRSS6Q8IU80 811 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 CASKIN2Q8WXE0 1202 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 ALG3Q92685 438 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 RBM41Q96IZ5 413 aaKnown RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 RSPH9Q9H1X1 276 aaPredicted RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 PDFQ9HBH1 243 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 BCCIPQ9P287 314 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 IPO11Q9UI26 975 aaKnown RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 PCDHGA2Q9Y5H1 932 aa13.18□□□□□ -0.3
SMPD1-202ENST00000526280 NYNRINQ9P2P1 1898 aaKnown RBP13.18□□□□□ -0.3
SMPD1-202ENST00000526280 APOL1O14791 398 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 ZSCAN12O43309 604 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 MFSD11O43934 449 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
SMPD1-202ENST00000526280 TERF1P54274 439 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 RWDD2BP57060 319 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 COPS2P61201 443 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 GBE1Q04446 702 aa13.17□□□□□ -0.3
SMPD1-202ENST00000526280 IL10RBQ08334 325 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms