RNA–Protein interactions for RNA: ENST00000522115.6

PTPN12-215, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 5

Gene PTPN12, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-215	ENST00000522115	ZNF549	Q6P9A3	640 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	TMEM57	Q8N5G2	664 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	C7orf57	Q8NEG2	295 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	ENGASE	Q8NFI3	743 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	B4GALNT2	Q8NHY0	566 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	TMEM163	Q8TC26	289 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	MASTL	Q96GX5	879 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	URB1-AS1	Q96HZ7	61 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	ZNF333	Q96JL9	665 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	PPP1R10	Q96QC0	940 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	FAM167B	Q9BTA0	163 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	IFT27	Q9BW83	186 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	ISCU	Q9H1K1	167 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	MRPL44	Q9H9J2	332 aa	Known RBP	4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	PLK2	Q9NYY3	685 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	FEM1B	Q9UK73	627 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115	RAI2	Q9Y5P3	530 aa		4.59	□□□□□ -1.67
PTPN12-215	ENST00000522115		B9A039	149 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	TNFRSF13B	O14836	293 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	SYN3	O14994	580 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	KIF1C	O43896	1103 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CNP	P09543	421 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CHRNB2	P17787	502 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CCKAR	P32238	428 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	MTNR1A	P48039	350 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CLCNKB	P51801	687 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	SELENOV	P59797	346 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	ZP1	P60852	638 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	ROR2	Q01974	943 aa	Known RBP	4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	FBXO47	Q5MNV8	452 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	TMEM268	Q5VZI3	342 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	PDXDC1	Q6P996	788 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	SYNE3	Q6ZMZ3	975 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	WDR5B	Q86VZ2	330 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	FAM217A	Q8IXS0	508 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	SCAI	Q8N9R8	606 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	USP38	Q8NB14	1042 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CMAS	Q8NFW8	434 aa	Predicted RBP	4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	TBC1D20	Q96BZ9	403 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	HERPUD2	Q9BSE4	406 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CHODL	Q9H9P2	273 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	GRHL1	Q9NZI5	618 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	PCDHA7	Q9UN72	937 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	CLDN16	Q9Y5I7	305 aa		4.58	□□□□□ -1.68
PTPN12-215	ENST00000522115	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	NBN	O60934	754 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	LCAT	P04180	440 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	KCNJ4	P48050	445 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	SYTL3	Q4VX76	610 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	GJB7	Q6PEY0	223 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	TRIM74	Q86UV6	250 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	TRIM73	Q86UV7	250 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	TMC8	Q8IU68	726 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	FTSJ3	Q8IY81	847 aa	Known RBP	4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	LRRC57	Q8N9N7	239 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	AFG1L	Q8WV93	481 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	NCSTN	Q92542	709 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	RMI1	Q9H9A7	625 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	PLAC1	Q9HBJ0	212 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	SEL1L	Q9UBV2	794 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	ICK	Q9UPZ9	632 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	DNAJC16	Q9Y2G8	782 aa		4.57	□□□□□ -1.68
PTPN12-215	ENST00000522115	SPRY3	O43610	288 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	MMP3	P08254	477 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	GNLY	P22749	145 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	CDC25A	P30304	524 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	SKIV2L2	P42285	1042 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	ARHGAP8	P85298	464 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	EGR4	Q05215	589 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	BYSL	Q13895	437 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	RPE65	Q16518	533 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	DCAF12L2	Q5VW00	463 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	NCAPH2	Q6IBW4	605 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	TMEM71	Q6P5X7	295 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	SERPINA11	Q86U17	422 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	LINS1	Q8NG48	757 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	ASB5	Q8WWX0	329 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	RILPL2	Q969X0	211 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	SH3KBP1	Q96B97	665 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	SF3B5	Q9BWJ5	86 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	NPL	Q9BXD5	320 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	KRTAP1-5	Q9BYS1	174 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	CATSPERB	Q9H7T0	1116 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	ACAD9	Q9H845	621 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	HIF1AN	Q9NWT6	349 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	HDAC6	Q9UBN7	1215 aa		4.56	□□□□□ -1.68
PTPN12-215	ENST00000522115	IGKV2D-30	A0A075B6S6	120 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115		A0A0A0MQY5	61 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	CLEC18A	A5D8T8	446 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	OR6C68	A6NDL8	312 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	STMND1	H3BQB6	276 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	STX16-NPEPL1	H3BU86	382 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	STX16	O14662	325 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	STRN	O43815	780 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	SOX30	O94993	753 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	ENO3	P13929	434 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	AVPR1A	P37288	418 aa		4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	CDKN2A	P42771	156 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-215	ENST00000522115	PAPOLA	P51003	745 aa	Known RBP	4.55	□□□□□ -1.68

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