RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 SPATA22Q8NHS9 363 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 MAML1Q92585 1016 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 MLPHQ9BV36 600 aaPredicted RBP27.77■■■□□ 2.04
TRNP1-201ENST00000522111 MUC3BQ9H195 1237 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 MAGEH1Q9H213 219 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 SFXN1Q9H9B4 322 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 VPS37BQ9H9H4 285 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 EYSQ5T1H1 3165 aa27.77■■■□□ 2.04
TRNP1-201ENST00000522111 GLDCP23378 1020 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 BMP8BP34820 402 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 KCNC3Q14003 757 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 RARS2Q5T160 578 aaKnown RBP27.76■■■□□ 2.03
TRNP1-201ENST00000522111 MARC1Q5VT66 337 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 FAM217AQ8IXS0 508 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 OXNAD1Q96HP4 312 aaPredicted RBP27.76■■■□□ 2.03
TRNP1-201ENST00000522111 NT5MQ9NPB1 228 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 MED4Q9NPJ6 270 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 EIF2B3Q9NR50 452 aaKnown RBP27.76■■■□□ 2.03
TRNP1-201ENST00000522111 ZNF510Q9Y2H8 683 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 ACTL7AQ9Y615 435 aa27.76■■■□□ 2.03
TRNP1-201ENST00000522111 ZNF197O14709 1029 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 MAXP61244 160 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 RNF219Q5W0B1 726 aaPredicted RBP27.75■■■□□ 2.03
TRNP1-201ENST00000522111 WFDC5Q8TCV5 224 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 SH3GL2Q99962 352 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 GLOD4Q9HC38 313 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 TBC1D30Q9Y2I9 924 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 GFRA2O00451 464 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 LINC01565O15544 149 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 OPA1O60313 960 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 MT-CYBP00156 380 aaPredicted RBP27.75■■■□□ 2.03
TRNP1-201ENST00000522111 HOXD9P28356 352 aaPredicted RBP27.75■■■□□ 2.03
TRNP1-201ENST00000522111 RENBPP51606 427 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 IL10RBQ08334 325 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 ITKQ08881 620 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 CDH18Q13634 790 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 HNRNPDQ14103 355 aaKnown RBP27.75■■■□□ 2.03
TRNP1-201ENST00000522111 KRT71Q3SY84 523 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 SETD3Q86TU7 594 aaPredicted RBP27.75■■■□□ 2.03
TRNP1-201ENST00000522111 NSMCE1Q8WV22 266 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 ARL8AQ96BM9 186 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 FRMD8Q9BZ67 464 aaPredicted RBP27.75■■■□□ 2.03
TRNP1-201ENST00000522111 PHACTR1Q9C0D0 580 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 ATP13A1Q9HD20 1204 aa27.75■■■□□ 2.03
TRNP1-201ENST00000522111 ILVBLA1L0T0 632 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 EIF3HO15372 352 aaKnown RBP eCLIP27.74■■■□□ 2.03
TRNP1-201ENST00000522111 PRAMEF11O60813 436 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 POU2F2P09086 479 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 SSTR1P30872 391 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 SLCO1A2P46721 670 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 SARNPP82979 210 aaKnown RBP27.74■■■□□ 2.03
TRNP1-201ENST00000522111 CHRDL2Q6WN34 429 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 ARID3BQ8IVW6 561 aaPredicted RBP27.74■■■□□ 2.03
TRNP1-201ENST00000522111 MPP5Q8N3R9 675 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 EPS8L3Q8TE67 593 aaKnown RBP27.74■■■□□ 2.03
TRNP1-201ENST00000522111 TTC25Q96NG3 672 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 APOL2Q9BQE5 337 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 RETREG1Q9H6L5 497 aa27.74■■■□□ 2.03
TRNP1-201ENST00000522111 XAB2Q9HCS7 855 aaKnown RBP27.74■■■□□ 2.03
TRNP1-201ENST00000522111 LUC7L3O95232 432 aaKnown RBP27.73■■■□□ 2.03
TRNP1-201ENST00000522111 AP2A1O95782 977 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 GLP2RO95838 553 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 MMP13P45452 471 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 EIF3BP55884 814 aaKnown RBP27.73■■■□□ 2.03
TRNP1-201ENST00000522111 SESN2P58004 480 aaPredicted RBP27.73■■■□□ 2.03
TRNP1-201ENST00000522111 CDK16Q00536 496 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 PRPSAP1Q14558 356 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 SKIDA1Q1XH10 827 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 PPP2R3CQ969Q6 453 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 TEX264Q9Y6I9 313 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 E2F8A0AVK6 867 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 TLDC2A0PJX2 215 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 GOLGA6L10A6NI86 522 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 CBX4O00257 560 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 RNF40O75150 1001 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 MYZAPP0CAP1 466 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 OXCT1P55809 520 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 GPX6P59796 221 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 CRADDP78560 199 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 LONRF1Q17RB8 773 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 CCDC38Q502W7 563 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 TCEAL5Q5H9L2 206 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 KCTD16Q68DU8 428 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 MFN1Q8IWA4 741 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 PALM2Q8IXS6 379 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 PDFQ9HBH1 243 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 MAD1L1Q9Y6D9 718 aa27.73■■■□□ 2.03
TRNP1-201ENST00000522111 SPTBN5Q9NRC6 3674 aaKnown RBP27.72■■■□□ 2.03
TRNP1-201ENST00000522111 TTC24A2A3L6 582 aaPredicted RBP27.72■■■□□ 2.03
TRNP1-201ENST00000522111 MZF1P28698 734 aaPredicted RBP27.72■■■□□ 2.03
TRNP1-201ENST00000522111 MAGEA3P43357 314 aa27.72■■■□□ 2.03
TRNP1-201ENST00000522111 LBRQ14739 615 aaKnown RBP27.72■■■□□ 2.03
TRNP1-201ENST00000522111 TTMPQ5BVD1 217 aa27.72■■■□□ 2.03
TRNP1-201ENST00000522111 CPXM2Q8N436 756 aa27.72■■■□□ 2.03
TRNP1-201ENST00000522111 OR52K1Q8NGK4 314 aa27.72■■■□□ 2.03
TRNP1-201ENST00000522111 CFAP36Q96G28 342 aa27.72■■■□□ 2.03
TRNP1-201ENST00000522111 CDCA3Q99618 268 aaPredicted RBP27.72■■■□□ 2.03
TRNP1-201ENST00000522111 TRIM56Q9BRZ2 755 aaKnown RBP27.72■■■□□ 2.03
TRNP1-201ENST00000522111 HYAL1Q12794 435 aa27.71■■■□□ 2.03
TRNP1-201ENST00000522111 KCTD11Q693B1 232 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms