RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ZNF91Q05481 1191 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 ZBTB16Q05516 673 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 PMPCAQ10713 525 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 RPE65Q16518 533 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 CCDC142Q17RM4 750 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 ARL13AQ5H913 290 aaPredicted RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 MTX3Q5HYI7 312 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 PIK3CD-AS1Q5SR53 167 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 PXDC1Q5TGL8 231 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 INO80CQ6PI98 192 aaPredicted RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 ADGRG6Q86SQ4 1221 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 SLC25A41Q8N5S1 370 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 DPP10Q8N608 796 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 PCYOX1LQ8NBM8 494 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 SETD9Q8NE22 299 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 TMEM170AQ8WVE7 144 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 IGFBPL1Q8WX77 278 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 ST8SIA4Q92187 359 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 IP6K1Q92551 441 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 CNOT9Q92600 299 aaKnown RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 HVCN1Q96D96 273 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 ZNF333Q96JL9 665 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 PHF7Q9BWX1 381 aaPredicted RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 QTRT1Q9BXR0 403 aaKnown RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 FRMD8Q9BZ67 464 aaPredicted RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 HIPK3Q9H422 1215 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 MROH8Q9H579 483 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 EPHX3Q9H6B9 360 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 SPAG4Q9NPE6 437 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 THSD1Q9NS62 852 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 ZDHHC7Q9NXF8 308 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 SLC25A10Q9UBX3 287 aaPredicted RBP3.29□□□□□ -1.88
SKP1-203ENST00000517625 HSF4Q9ULV5 492 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 CNPY2Q9Y2B0 182 aa3.29□□□□□ -1.88
SKP1-203ENST00000517625 TTBK1Q5TCY1 1321 aaPredicted RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 TRBV5-7A0A0A0MS05 114 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 TCRBV7S3A2A0A539 114 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 A6NLC8 198 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 TEX22C9J3V5 150 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 F5H0A9 414 aaPredicted RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 EPB41L2O43491 1005 aaKnown RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 TMCC1O94876 653 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 SERPINC1P01008 464 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 TBXAS1P24557 533 aaPredicted RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 KRT9P35527 623 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 GPR12P47775 334 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ALDH7A1P49419 539 aaKnown RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 PLCD1P51178 756 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 FOXD4Q12950 439 aaPredicted RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 NAA25Q14CX7 972 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 SLC18A3Q16572 532 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 NFIL3Q16649 462 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 PRICKLE4Q2TBC4 344 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ZNF766Q5HY98 468 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 C6orf10Q5SRN2 563 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 TTLL5Q6EMB2 1281 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 DSTYKQ6XUX3 929 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 TRAPPC11Q7Z392 1133 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 RNF144BQ7Z419 303 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 WDR5BQ86VZ2 330 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 CCDC25Q86WR0 208 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ZNF575Q86XF7 245 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ARMC8Q8IUR7 673 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 GHDCQ8N2G8 530 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 TCP11L2Q8N4U5 519 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ARFGAP1Q8N6T3 406 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 C11orf65Q8NCR3 313 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 PPHLN1Q8NEY8 458 aaKnown RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 NFKBIDQ8NI38 313 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 DENND1AQ8TEH3 1009 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 RFFLQ8WZ73 363 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 DDB2Q92466 427 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 HSPH1Q92598 858 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 STAMQ92783 540 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 KAT2AQ92830 837 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 EVI5LQ96CN4 794 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 MPP4Q96JB8 637 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 SCNM1Q9BWG6 230 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ZHX3Q9H4I2 956 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ACAD9Q9H845 621 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ATP8A2Q9NTI2 1148 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 IFT80Q9P2H3 777 aaPredicted RBP3.28□□□□□ -1.88
SKP1-203ENST00000517625 UTS2RQ9UKP6 389 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 FBXO4Q9UKT5 387 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 ICKQ9UPZ9 632 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 CYP46A1Q9Y6A2 500 aa3.28□□□□□ -1.88
SKP1-203ENST00000517625 A0A0G2JK05 382 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 PER2O15055 1255 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 MDM4O15151 490 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 SH3BP5O60239 455 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 ADAP00813 363 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 IFNA2P01563 188 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 TMEM191BP0C7N4 346 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 UNGP13051 313 aaPredicted RBP3.27□□□□□ -1.89
SKP1-203ENST00000517625 PTGER1P34995 402 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 PAFAH1B1P43034 410 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 RASSF2P50749 326 aa3.27□□□□□ -1.89
SKP1-203ENST00000517625 YWHAZP63104 245 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms