RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 NDST2P52849 883 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 HADHBP55084 474 aaKnown RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 PARP15Q460N3 678 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 PLK5Q496M5 336 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 ZNF776Q68DI1 518 aaPredicted RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 Q6ZVU0 165 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 METTL3Q86U44 580 aaKnown RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 MMAAQ8IVH4 418 aaKnown RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 DESI2Q9BSY9 194 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 TNKS2Q9H2K2 1166 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 KLHL11Q9NVR0 708 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 SALL4Q9UJQ4 1053 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 MFHAS1Q9Y4C4 1052 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 DUSP10Q9Y6W6 482 aa14.25□□□□□ -0.13
USP46-209ENST00000514536 PTPRZ1P23471 2315 aaPredicted RBP14.25□□□□□ -0.13
USP46-209ENST00000514536 IGHV1OR15-9A0A0B4J2B8 117 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 BUB1O43683 1085 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 DNTTP04053 509 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 TNNT1P13805 278 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 SLC1A1P43005 524 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 SERPINH1P50454 418 aaKnown RBP14.24□□□□□ -0.13
USP46-209ENST00000514536 PAPOLAP51003 745 aaKnown RBP14.24□□□□□ -0.13
USP46-209ENST00000514536 DNA2P51530 1060 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 TPMTP51580 245 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 CLCN6P51797 869 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 VAV2P52735 878 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 SERINC3Q13530 473 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 C22orf39Q6P5X5 142 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 KIAA1328Q86T90 577 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 DEFB119Q8N690 84 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 NPWQ8N729 165 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 FAM71BQ8TC56 605 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 OR8D1Q8WZ84 308 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 TSC1Q92574 1164 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 ZC3H10Q96K80 434 aaKnown RBP14.24□□□□□ -0.13
USP46-209ENST00000514536 CALN1Q9BXU9 219 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 LACRTQ9GZZ8 138 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 ETNK2Q9NVF9 386 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 USP36Q9P275 1121 aaKnown RBP14.24□□□□□ -0.13
USP46-209ENST00000514536 FCF1Q9Y324 198 aaKnown RBP14.24□□□□□ -0.13
USP46-209ENST00000514536 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
USP46-209ENST00000514536 MUC22E2RYF6 1773 aaPredicted RBP14.23□□□□□ -0.13
USP46-209ENST00000514536 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 ARHGAP42A6NI28 874 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 SPOPO43791 374 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 RHOBTB1O94844 696 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 PSMD8P48556 350 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 NAP1L1P55209 391 aaKnown RBP14.23□□□□□ -0.13
USP46-209ENST00000514536 ZBTB16Q05516 673 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 DPYSL3Q14195 570 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 ELAVL3Q14576 367 aaKnown RBP14.23□□□□□ -0.13
USP46-209ENST00000514536 PDK2Q15119 407 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 ELF2Q15723 593 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 CST6Q15828 149 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 AFMIDQ63HM1 303 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 LAIR1Q6GTX8 287 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 TMCO3Q6UWJ1 677 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 FAM124AQ86V42 546 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 C11orf74Q86VG3 221 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 MAP7D3Q8IWC1 876 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 ARHGAP12Q8IWW6 846 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 TP53INP2Q8IXH6 220 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 TMEFF1Q8IYR6 380 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 LZTR1Q8N653 840 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 GANCQ8TET4 914 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 RAPGEF5Q92565 580 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 GOLPH3Q9H4A6 298 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 RCOR3Q9P2K3 495 aaPredicted RBP14.23□□□□□ -0.13
USP46-209ENST00000514536 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
USP46-209ENST00000514536 RIF1Q5UIP0 2472 aaKnown RBP14.23□□□□□ -0.13
USP46-209ENST00000514536 FANCMQ8IYD8 2048 aa14.23□□□□□ -0.13
USP46-209ENST00000514536 CXorf51AA0A1B0GTR3 108 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 ZSCAN5CA6NGD5 496 aaPredicted RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 J3KR12 359 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 DFFAO00273 331 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 MCF2LO15068 1137 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 MID1O15344 667 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 PJA2O43164 708 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 NDUFS2O75306 463 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 ZNF821O75541 412 aaPredicted RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 IL1BP01584 269 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 C7P10643 843 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 KDELR1P24390 212 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 CD6P30203 668 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 SLC8A1P32418 973 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 LRRC38Q5VT99 294 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 PMS2CLQ68D20 193 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 SLC36A4Q6YBV0 504 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 LPCAT2Q7L5N7 544 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 DCLK2Q8N568 766 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 OR2A12Q8NGT7 310 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 TPCN2Q8NHX9 752 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 TOE1Q96GM8 510 aaKnown RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 CEP44Q9C0F1 390 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 PABPC3Q9H361 631 aaKnown RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 WSB2Q9NYS7 404 aaPredicted RBP14.22□□□□□ -0.13
USP46-209ENST00000514536 NCDNQ9UBB6 729 aa14.22□□□□□ -0.13
USP46-209ENST00000514536 CKAP5Q14008 2032 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms