RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 ADORA2AP29274 412 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 HPCAL1P37235 193 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PBX1P40424 430 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RFX3P48380 749 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PLK1P53350 603 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 POLR2LP62875 67 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 FAM171A1Q5VUB5 890 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 NAIF1Q69YI7 327 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PIWIL4Q7Z3Z4 852 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 KRT73Q86Y46 540 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 C12orf56Q8IXR9 622 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 ZNF557Q8N988 423 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PYDC1Q8WXC3 89 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 EBNA1BP2Q99848 306 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 HSD17B14Q9BPX1 270 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RERGLQ9H628 205 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 SAE1Q9UBE0 346 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 CPA4Q9UI42 421 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 LINC00854A0A1B0GVQ3 168 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 CENPXA8MT69 81 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 ZBTB14O43829 449 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RPN2P04844 631 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 FMO4P31512 558 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 BST1Q10588 318 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RSBN1Q5VWQ0 802 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 IL27RAQ6UWB1 636 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 FAM183BPQ6ZVS7 135 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 HDDC2Q7Z4H3 204 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 MED8Q96G25 268 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 INVSQ9Y283 1065 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 SESN1Q9Y6P5 492 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 MAFO75444 373 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 CKBP12277 381 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 COX4I1P13073 169 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 CHN2P52757 468 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PKNOX1P55347 436 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 TTC23Q5W5X9 447 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 BNIPLQ7Z465 357 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 TRMT11Q7Z4G4 463 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RIOX2Q8IUF8 465 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 CROCCP3Q8IVE0 287 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 ZSCAN18Q8TBC5 510 aaPredicted RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 POP5Q969H6 163 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 DEPDC7Q96QD5 511 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 YME1L1Q96TA2 773 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 SNRPB2P08579 225 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 ACSM2AQ08AH3 577 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PPIL2Q13356 520 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 BOP1Q14137 746 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 TIMM50Q3ZCQ8 353 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 CELF3Q5SZQ8 465 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 ACSM2BQ68CK6 577 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 RP9Q8TA86 221 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 PTCD3Q96EY7 689 aaKnown RBP12.65□□□□□ -0.38
COL11A1-210ENST00000512756 WDR18Q9BV38 432 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 SNX8Q9Y5X2 465 aa12.65□□□□□ -0.38
COL11A1-210ENST00000512756 KCNH1O95259 989 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 BDNFP23560 247 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 GRK4P32298 578 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 IFNGR2P38484 337 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ST13P50502 369 aaKnown RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 C21orf59P57076 290 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ZFPM1Q8IX07 1006 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 C8orf59Q8N0T1 100 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 DCUN1D5Q9BTE7 237 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 C2CD2Q9Y426 696 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 MTF2Q9Y483 593 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 PCDHB12Q9Y5F1 795 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 FAM25AB3EWG3 89 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 FAM25CB3EWG5 89 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 FAM25GB3EWG6 89 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 HDAC3O15379 428 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 SERPINA6P08185 405 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 GUCA1AP43080 201 aaPredicted RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ALDH9A1P49189 494 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 NPNTQ6UXI9 565 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ZNF276Q8N554 614 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ANKRD52Q8NB46 1076 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 RIBC2Q9H4K1 309 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 CRYL1Q9Y2S2 319 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 RAP2CQ9Y3L5 183 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 EPN2O95208 641 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 MLYCDO95822 493 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ACVR2BQ13705 512 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 GSTA3Q16772 222 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 B3GNT6Q6ZMB0 384 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ZNF605Q86T29 641 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 SERHL2Q9H4I8 314 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 REEP1Q9H902 201 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 HMG20AQ9NP66 347 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ACP6Q9NPH0 428 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 SERHLQ9NQF3 203 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 DDX18Q9NVP1 670 aaKnown RBP12.64□□□□□ -0.39
COL11A1-210ENST00000512756 MARCH2Q9P0N8 246 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 ZMYM5Q9UJ78 669 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 TYMPP19971 482 aa12.64□□□□□ -0.39
COL11A1-210ENST00000512756 MARCKSL1P49006 195 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms