RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TTC7BQ86TV6 843 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 TMEM173Q86WV6 379 aaPredicted RBP11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 NPWQ8N729 165 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 CCNYQ8ND76 341 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 RBM15BQ8NDT2 890 aaKnown RBP11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 GPR152Q8TDT2 470 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 FAM192AQ9GZU8 254 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 PRDM12Q9H4Q4 367 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 OR12D3Q9UGF7 316 aa11.24□□□□□ -0.61
SH3RF1-203ENST00000508685 A0A0A0MRY4 1105 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 F9P00740 461 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SERPINE1P05121 402 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 PDHA1P08559 390 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 GRIA1P42261 906 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 AIF1P55008 147 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 XIAPP98170 497 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 RCN2Q14257 317 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ARL13BQ3SXY8 428 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 FASTKD1Q53R41 847 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 MROH9Q5TGP6 573 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 TREML1Q86YW5 311 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ULK2Q8IYT8 1036 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 NRG4Q8WWG1 115 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 RNF34Q969K3 372 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 P2RY11Q96G91 374 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SPATA13Q96N96 652 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 TRIM56Q9BRZ2 755 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 PPP1R12CQ9BZL4 782 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 NMUR1Q9HB89 426 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 OSER1Q9NX31 292 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 DNAJC28Q9NX36 388 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 MARCH5Q9NX47 278 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 NDE1Q9NXR1 346 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 RRN3Q9NYV6 651 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ARMCX1Q9P291 453 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SFMBT1Q9UHJ3 866 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 CDH23Q9H251 3354 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SF3B1O75533 1304 aaKnown RBP eCLIP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 HMX2A2RU54 273 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 KCNK1O00180 336 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 RNF103O00237 685 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 CLGNO14967 610 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 OPHN1O60890 802 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SOAT2O75908 522 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 LRIG2O94898 1065 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 IGLV3-25P01717 112 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ANPEPP15144 967 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 PGAM1P18669 254 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SP100P23497 879 aaPredicted RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 PRDX6P30041 224 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SLC11A1P49279 550 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 BMPR2Q13873 1038 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 PAFAH1B3Q15102 231 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 HSF5Q4G112 596 aaPredicted RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 CTXN3Q4LDR2 81 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SCD5Q86SK9 330 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 CRIPAKQ8N1N5 446 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SCML4Q8N228 414 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ARHGAP18Q8N392 663 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ATAD1Q8NBU5 361 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SEPT8Q92599 483 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 JADE3Q92613 823 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 TSC22D3Q99576 134 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 THTPAQ9BU02 230 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 MECRQ9BV79 373 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ELAC1Q9H777 363 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 LRFN2Q9ULH4 789 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 ASB3Q9Y575 518 aa11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 MRPL42Q9Y6G3 142 aaKnown RBP11.23□□□□□ -0.61
SH3RF1-203ENST00000508685 SKAP2O75563 359 aaPredicted RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 COL6A1P12109 1028 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 MX2P20592 715 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 CRABP2P29373 138 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 CDC25CP30307 473 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 SLC1A6P48664 564 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 CCNHP51946 323 aaPredicted RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 ARPP19P56211 112 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 USP46P62068 366 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 MLLT1Q03111 559 aaPredicted RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 KDSRQ06136 332 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 NIPAL4Q0D2K0 466 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 EIF4EBP2Q13542 120 aaPredicted RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 FRG1Q14331 258 aaKnown RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 CCDC153Q494R4 210 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 RTP2Q5QGT7 225 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 GRTP1Q5TC63 336 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 C1orf146Q5VVC0 180 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 BTBD8Q5XKL5 378 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 MBLAC2Q68D91 279 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 TRMT10BQ6PF06 316 aaKnown RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 RSPO2Q6UXX9 243 aaPredicted RBP11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 RIPOR1Q6ZS17 1223 aa11.22□□□□□ -0.61
SH3RF1-203ENST00000508685 DEFB128Q7Z7B8 93 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms