RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SEL1LQ9UBV2 794 aa4.88□□□□□ -1.63
NUP54-206ENST00000508465 CPSF3Q9UKF6 684 aaKnown RBP4.88□□□□□ -1.63
NUP54-206ENST00000508465 SSX2IPQ9Y2D8 614 aa4.88□□□□□ -1.63
NUP54-206ENST00000508465 CDY1Q9Y6F8 540 aa4.88□□□□□ -1.63
NUP54-206ENST00000508465 MYH11P35749 1972 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TMEM189-UBE2V1I3L0A0 370 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 RNASET2O00584 256 aaKnown RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 PRRG1O14668 218 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TGFB1I1O43294 461 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 DCXO43602 365 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 KLRC4O43908 158 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TBC1D4O60343 1298 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 N4BP1O75113 896 aaKnown RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 STC2O76061 302 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 ADRB2P07550 413 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 OR4Q2P0C623 313 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 LILRA4P59901 499 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 KRT85P78386 507 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 ELAVL2Q12926 359 aaKnown RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 STK4Q13043 487 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 POSTNQ15063 836 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 KYAT1Q16773 422 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 CTXN3Q4LDR2 81 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TRIM61Q5EBN2 209 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TMEM31Q5JXX7 168 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 C9orf57Q5W0N0 161 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 LMBRD2Q68DH5 695 aaPredicted RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 FBXO42Q6P3S6 717 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 EPM2AIP1Q7L775 607 aaPredicted RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 CBWD2Q8IUF1 395 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 ARHGEF19Q8IW93 802 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 EFCAB13Q8IY85 973 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 CSGALNACT2Q8N6G5 542 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 BEST2Q8NFU1 509 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 ITFG1Q8TB96 612 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 SCFD1Q8WVM8 642 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 COQ10AQ96MF6 247 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 PGLYRP2Q96PD5 576 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 MYADMQ96S97 322 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 LRRC27Q9C0I9 530 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TNMDQ9H2S6 317 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 CUEDC2Q9H467 287 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 ZNF768Q9H5H4 540 aaKnown RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 SFXN1Q9H9B4 322 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.87□□□□□ -1.63
NUP54-206ENST00000508465 RBAKQ9NYW8 714 aaPredicted RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 MTRRQ9UBK8 725 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 STK39Q9UEW8 545 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 FBXL5Q9UKA1 691 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 AGAP1Q9UPQ3 857 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 EXOC7Q9UPT5 735 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 STYXL1Q9Y6J8 313 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 TDRD15B5MCY1 1934 aaKnown RBP4.87□□□□□ -1.63
NUP54-206ENST00000508465 ZMYM2Q9UBW7 1377 aa4.87□□□□□ -1.63
NUP54-206ENST00000508465 NCOR1O75376 2440 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 MYO10Q9HD67 2058 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 CCDC163A0A0D9SF12 145 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TCRBV16S1A1N1A0A5B0 115 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ANO9A1A5B4 782 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 FSD2A1L4K1 749 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TMEM221A6NGB7 291 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ZNF233A6NK53 670 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TMEM200CA6NKL6 621 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 AHRRA9YTQ3 701 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 H7C4K7 107 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 M0R296 226 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 PIRO00625 290 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 CYB561D2O14569 222 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 EXTL3O43909 919 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 DNAJC6O75061 913 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 SOAT2O75908 522 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 RPN1P04843 607 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 ALADP13716 330 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 SCP2P22307 547 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 LRPAP1P30533 357 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ELF1P32519 619 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 SYKP43405 635 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 CASP4P49662 377 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ELLP55199 621 aaPredicted RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 CREMQ03060 361 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ADCY1Q08828 1119 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 BFSP1Q12934 665 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 PPM1LQ5SGD2 360 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 LIN9Q5TKA1 542 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 WSCD1Q658N2 575 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ISM2Q6H9L7 571 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TIGD7Q6NT04 549 aaPredicted RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 ARMCX5Q6P1M9 558 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 CNNM4Q6P4Q7 775 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 UNC13DQ70J99 1090 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 USP37Q86T82 979 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 TDRD5Q8NAT2 981 aaKnown RBP4.86□□□□□ -1.63
NUP54-206ENST00000508465 ATAD1Q8NBU5 361 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 APPL2Q8NEU8 664 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 OR5B17Q8NGF7 314 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 OR5M3Q8NGP4 307 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ZNF461Q8TAF7 563 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 ING5Q8WYH8 240 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 CCDC127Q96BQ5 260 aa4.86□□□□□ -1.63
NUP54-206ENST00000508465 HVCN1Q96D96 273 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms