RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 KIAA1143Q96AT1 154 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CCDC120Q96HB5 630 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 C18orf12Q96KH6 178 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CCDC74BQ96LY2 380 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF560Q96MR9 790 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 AIFM3Q96NN9 605 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 HAPLN3Q96S86 360 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 KLF6Q99612 283 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 SPOCK3Q9BQ16 436 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 EFHD1Q9BUP0 239 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 RUSC1Q9BVN2 902 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 NUDT9Q9BW91 350 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 RNF26Q9BY78 433 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 INTS2Q9H0H0 1204 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 DPEP3Q9H4B8 488 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ASB7Q9H672 318 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 RDH14Q9HBH5 336 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CCM2LQ9NUG4 571 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 MAP10Q9P2G4 905 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 GGA2Q9UJY4 613 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 LSM7Q9UK45 103 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 RBM19Q9Y4C8 960 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ANKRD12Q6UB98 2062 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 TRRAPQ9Y4A5 3859 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 A0A1B0GUH1 482 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 CDC14CA4D256 554 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SFI1A8K8P3 1242 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 B4E171 279 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 TISP43B9A030 160 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 INAFM1C9JVW0 142 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SLC27A2O14975 620 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SGSM2O43147 1006 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 DPM1O60762 260 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 HUS1O60921 280 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 RNASEH1O60930 286 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 LRCH4O75427 683 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 STK17BO94768 372 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 RECKO95980 971 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ANXA6P08133 673 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PDGFRBP09619 1106 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 THRAP10827 490 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PNLIPP16233 465 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 IGFBP2P18065 325 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 WARSP23381 471 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 RPA1P27694 616 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 CORO1AP31146 461 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 AKT2P31751 481 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 CSF2RBP32927 897 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ATP5C1P36542 298 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 CSKP41240 450 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PNPLA4P41247 253 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 TSPAN7P41732 249 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PLA2G4AP47712 749 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ACOT2P49753 483 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 MEOX1P50221 254 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 THOP1P52888 689 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 LIMK2P53671 638 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PFN3P60673 137 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 RUNX1T1Q06455 604 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 Q0VFX4 171 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ELOAQ14241 798 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 MAP7Q14244 749 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 MAPRE1Q15691 268 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 CHRNA6Q15825 494 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 KYAT1Q16773 422 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ANO6Q4KMQ2 910 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 VWA2Q5GFL6 755 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SEL1L3Q68CR1 1132 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 KCTD16Q68DU8 428 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ESRP1Q6NXG1 681 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 OGFOD3Q6PK18 319 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 C1orf186Q6ZWK4 172 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 GPRIN1Q7Z2K8 1008 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SCD5Q86SK9 330 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 MRGPRGQ86SM5 289 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 HORMAD1Q86X24 394 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SFR1Q86XK3 245 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 PHACTR4Q8IZ21 702 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 LRRC52Q8N7C0 313 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 FDCSPQ8NFU4 85 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 DDI1Q8WTU0 396 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 FRS2Q8WU20 508 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 GLMNQ92990 594 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 TNFRSF25Q93038 417 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 HVCN1Q96D96 273 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 FAM212AQ96EL1 285 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SMAD5Q99717 465 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 ELOVL4Q9GZR5 314 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 TMEM60Q9H2L4 133 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 BHMT2Q9H2M3 363 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 LIME1Q9H400 295 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 APMAPQ9HDC9 416 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SLC39A1Q9NY26 324 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SIRPGQ9P1W8 387 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SPASTQ9UBP0 616 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 GULP1Q9UBP9 304 aa3.45□□□□□ -1.86
TCOF1-208ENST00000506063 APOBEC3BQ9UH17 382 aaKnown RBP3.45□□□□□ -1.86
TCOF1-208ENST00000506063 SLCO3A1Q9UIG8 710 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms