RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 FAM114A1Q8IWE2 563 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 STK40Q8N2I9 435 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 KDM1BQ8NB78 822 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 SHC3Q92529 594 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 TRIM4Q9C037 500 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 PLCB1Q9NQ66 1216 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 SLC25A13Q9UJS0 675 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 DNAJC12Q9UKB3 198 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
PDLIM7-213ENST00000505074 DOCK9Q9BZ29 2069 aa16.46■□□□□ 0.22
PDLIM7-213ENST00000505074 ITIH6Q6UXX5 1313 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3DA0A087WVF3 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3IA0A087WXS9 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3EA0A087X179 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3KA0A087X1G2 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 FAM170AA1A519 330 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 GTPBP10A4D1E9 387 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3FA6NER0 549 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3LB9A6J9 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 CSO75390 466 aaKnown RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 ADH1BP00325 375 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 GLI1P08151 1106 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3HP0C7X1 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 PNMA6AP0CW24 399 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 GOT1P17174 413 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 MZF1P28698 734 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 GGCXP38435 758 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 ADPRHP54922 357 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 SULT2A1Q06520 285 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 OVGP1Q12889 678 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 RAPGEF1Q13905 1077 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 MAN2A1Q16706 1144 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 ACCSLQ4AC99 568 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 HSP90AA4PQ58FG1 418 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3GQ6DHY5 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3CQ6IPX1 549 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 CCDC81Q6ZN84 652 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 TBC1D3Q8IZP1 549 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 MLKLQ8NB16 471 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 SLC2A13Q96QE2 648 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 ASNSD1Q9NWL6 643 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 AJAP1Q9UKB5 411 aaPredicted RBP16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 VANGL2Q9ULK5 521 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 PCDHGC3Q9UN70 934 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 PIEZO2Q9H5I5 2752 aa16.45■□□□□ 0.22
PDLIM7-213ENST00000505074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 LATO43561 262 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 BNIP3LO60238 219 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 DAB1O75553 588 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 ERBB2P04626 1255 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 VAV1P15498 845 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 RBMS1P29558 406 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 OXCT1P55809 520 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 RNASE9P60153 205 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 ZNF177Q13360 481 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 ELAVL3Q14576 367 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 STAT4Q14765 748 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 ARID5BQ14865 1188 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 FBXL22Q6P050 247 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 TMC6Q7Z403 805 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 SLC47A2Q86VL8 602 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 IRF2BP1Q8IU81 584 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 WDTC1Q8N5D0 677 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 OR4C6Q8NH72 309 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 PRMT1Q99873 361 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 SIK2Q9H0K1 926 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 ABCG4Q9H172 646 aa16.44■□□□□ 0.22
PDLIM7-213ENST00000505074 M0QYT0 321 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 CKMT1AP12532 417 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 ZNF18P17022 549 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 C5AR1P21730 350 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 NUDT1P36639 197 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 PPP2CBP62714 309 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 PPP2CAP67775 309 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 SLC6A3Q01959 620 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 AUHQ13825 339 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 PTPN20Q4JDL3 420 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 C6orf132Q5T0Z8 1188 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 IGF2-ASQ6U949 168 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 OLFML1Q6UWY5 402 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 DSG4Q86SJ6 1040 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 SLC25A45Q8N413 288 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 AADATQ8N5Z0 425 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 OR8D1Q8WZ84 308 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 PTPRN2Q92932 1015 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 PPP1R9BQ96SB3 815 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 FAM129BQ96TA1 746 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 MUC3BQ9H195 1237 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 SIX2Q9NPC8 291 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 VPS28Q9UK41 221 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 DMTF1Q9Y222 760 aa16.43■□□□□ 0.22
PDLIM7-213ENST00000505074 FOXN3O00409 490 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-213ENST00000505074 GP1BAP07359 652 aa16.42■□□□□ 0.22
PDLIM7-213ENST00000505074 DGKAP23743 735 aa16.42■□□□□ 0.22
PDLIM7-213ENST00000505074 NOS2P35228 1153 aa16.42■□□□□ 0.22
PDLIM7-213ENST00000505074 SULT1E1P49888 294 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms