RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 NOP2P46087 812 aaKnown RBP8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 CREB5Q02930 508 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 GBE1Q04446 702 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 MBLAC2Q68D91 279 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 ARHGAP36Q6ZRI8 547 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 MFN1Q8IWA4 741 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMIEQ8NEW7 156 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 ARRDC2Q8TBH0 407 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 RPRD1AQ96P16 312 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 NACA2Q9H009 215 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 TBC1D17Q9HA65 648 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 DKK3Q9UBP4 350 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 PCYOX1Q9UHG3 505 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 BDP1A6H8Y1 2624 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 APOL1O14791 398 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 HSPA9P38646 679 aaKnown RBP8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 CTSOP43234 321 aaPredicted RBP8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 TUBB2AQ13885 445 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 HNRNPDQ14103 355 aaKnown RBP8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 TFDP2Q14188 446 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 CDKN3Q16667 212 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 HNRNPA1L2Q32P51 320 aaKnown RBP8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 PRELID2Q8N945 189 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 KCTD6Q8NC69 237 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 HSPH1Q92598 858 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 TUBGCP5Q96RT8 1024 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 TUBB2BQ9BVA1 445 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 DEC1Q9P2X7 70 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 APODP05090 189 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PRKCHP24723 683 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 EPHB2P29323 1055 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ADRA1AP35348 466 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PTGIRP43119 386 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PON2Q15165 354 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 SLC45A4Q5BKX6 768 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 CCDC26Q8TAB7 109 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 LRIG1Q96JA1 1093 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 DNAJC17Q9NVM6 304 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PACSIN2Q9UNF0 486 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 R3HDM2Q9Y2K5 976 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 MUSKO15146 869 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TCP1P17987 556 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 GLDCP23378 1020 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 CD68P34810 354 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 GEMIN4P57678 1058 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ECT2LQ008S8 904 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF177Q13360 481 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ZNF234Q14588 700 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 RPS6KA1Q15418 735 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 RNF219Q5W0B1 726 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 EGFLAMQ63HQ2 1017 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMCO3Q6UWJ1 677 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 SPEM1Q8N4L4 309 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PCDH20Q8N6Y1 951 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMEM105Q8N8V8 129 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 FBXO4Q9UKT5 387 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ANTXRLA6NF34 631 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 RNF103O00237 685 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 SPOPO43791 374 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TSPAN3O60637 253 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 RAMP2O60895 175 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 SUN1O94901 812 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 COL9A1P20849 921 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 CES1P23141 567 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 OR1E1P30953 314 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ARL4AP40617 200 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TRMT11Q7Z4G4 463 aaKnown RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 CCDC117Q8IWD4 279 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 CNTD1Q8N815 330 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TTC13Q8NBP0 860 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 OR2A12Q8NGT7 310 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 DTX3LQ8TDB6 740 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 DDI1Q8WTU0 396 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 COG1Q8WTW3 980 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 GPR27Q9NS67 375 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TMEM131Q92545 1883 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 ARHGAP42A6NI28 874 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 KIF2AO00139 706 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 MOCS2O96007 188 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 CTSLP07711 333 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 GGCXP38435 758 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 IL12RB1P42701 662 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 POLD3Q15054 466 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TIGD7Q6NT04 549 aaPredicted RBP8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PKN3Q6P5Z2 889 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 NCEH1Q6PIU2 408 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 TPGS1Q6ZTW0 290 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 WDR5BQ86VZ2 330 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 NUDCD1Q96RS6 583 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 LYSMD1Q96S90 227 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 VAT1Q99536 393 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 MRFAP1Q9Y605 127 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 WASF2Q9Y6W5 498 aa8.45□□□□□ -1.06
CDC42SE2-208ENST00000505065 PDE2AO00408 941 aaPredicted RBP8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 TJP3O95049 919 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 RHOCP08134 193 aa8.44□□□□□ -1.06
CDC42SE2-208ENST00000505065 IMP4Q96G21 291 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms